Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   P5628_RS20800 Genome accession   NZ_CP120577
Coordinates   4023533..4024327 (-) Length   264 a.a.
NCBI ID   WP_003242676.1    Uniprot ID   C0SP91
Organism   Bacillus subtilis strain PRO53     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4018533..4029327
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5628_RS20775 (P5628_20775) rocD 4018986..4020191 (-) 1206 WP_024571526.1 ornithine aminotransferase -
  P5628_RS20780 (P5628_20780) rocR 4020429..4021814 (+) 1386 WP_277709185.1 arginine utilization regulatory protein RocR -
  P5628_RS20785 (P5628_20785) - 4021796..4021984 (-) 189 Protein_4044 ATP-binding protein -
  P5628_RS20790 (P5628_20790) - 4022101..4022229 (-) 129 WP_003242634.1 hypothetical protein -
  P5628_RS20795 (P5628_20795) htrA 4022249..4023451 (-) 1203 WP_021481077.1 serine protease HtrC Regulator
  P5628_RS20800 (P5628_20800) vicX 4023533..4024327 (-) 795 WP_003242676.1 MBL fold metallo-hydrolase Regulator
  P5628_RS20805 (P5628_20805) walI 4024349..4025191 (-) 843 WP_064671690.1 WalRK two-component regulatory system regulator WalI -
  P5628_RS20810 (P5628_20810) walH 4025178..4026545 (-) 1368 WP_072175742.1 WalRK two-component regulatory system regulator WalH -
  P5628_RS20815 (P5628_20815) walK 4026535..4028370 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  P5628_RS20820 (P5628_20820) walR 4028378..4029085 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29256.25 Da        Isoelectric Point: 5.8036

>NTDB_id=732761 P5628_RS20800 WP_003242676.1 4023533..4024327(-) (vicX) [Bacillus subtilis strain PRO53]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=732761 P5628_RS20800 WP_003242676.1 4023533..4024327(-) (vicX) [Bacillus subtilis strain PRO53]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAGCGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0SP91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53