Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   P5628_RS17850 Genome accession   NZ_CP120577
Coordinates   3423908..3424621 (-) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis strain PRO53     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3418908..3429621
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5628_RS17830 (P5628_17830) yvcT 3419052..3420029 (+) 978 WP_134991786.1 D-glycerate dehydrogenase -
  P5628_RS17835 (P5628_17835) psdB 3420067..3422007 (-) 1941 WP_277715478.1 lantibiotic ABC transporter permease PsdB -
  P5628_RS17840 (P5628_17840) psdA 3421982..3422761 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  P5628_RS17845 (P5628_17845) psdS 3422844..3423914 (-) 1071 WP_163131460.1 two-component sensor histidine kinase PsdS -
  P5628_RS17850 (P5628_17850) braR 3423908..3424621 (-) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  P5628_RS17855 (P5628_17855) - 3424768..3424977 (+) 210 WP_029318346.1 hypothetical protein -
  P5628_RS17860 (P5628_17860) yvcN 3425013..3425777 (-) 765 WP_015714771.1 arylamine N-acetyltransferase -
  P5628_RS17865 (P5628_17865) crh 3425778..3426035 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  P5628_RS17870 (P5628_17870) whiA 3426059..3427009 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  P5628_RS17875 (P5628_17875) mgfK 3427032..3427985 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  P5628_RS17880 (P5628_17880) rapZ 3427987..3428874 (-) 888 WP_003228143.1 RNase adapter RapZ -
  P5628_RS17885 (P5628_17885) yvcI 3428900..3429376 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=732744 P5628_RS17850 WP_003244535.1 3423908..3424621(-) (braR) [Bacillus subtilis strain PRO53]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=732744 P5628_RS17850 WP_003244535.1 3423908..3424621(-) (braR) [Bacillus subtilis strain PRO53]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAGAATGAGGCCGAATGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGTTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43