Detailed information NTG0732720

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: P5628_RS13985
• Genome accession: NZ_CP120577
• Coordinates: 2661176..2662441 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain PRO53
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2656176..2667441

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5628_RS13965 (P5628_13965)	yrrB	2657547..2658167 (-)	621	WP_205764506.1	tetratricopeptide repeat protein	-
P5628_RS13970 (P5628_13970)	mnmA	2658253..2659368 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
P5628_RS13975 (P5628_13975)	iscSA	2659399..2660538 (-)	1140	WP_277708861.1	cysteine desulfurase family protein	-
P5628_RS13980 (P5628_13980)	cymR	2660557..2660973 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
P5628_RS13985 (P5628_13985)	rarA	2661176..2662441 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
P5628_RS13990 (P5628_13990)	tcdA	2662481..2663245 (-)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
P5628_RS14000 (P5628_14000)	aspS	2663580..2665358 (-)	1779	WP_015714438.1	aspartate--tRNA ligase	-
P5628_RS14005 (P5628_14005)	hisS	2665372..2666646 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
P5628_RS14010 (P5628_14010)	yrzK	2667028..2667198 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=732720 P5628_RS13985 WP_014480427.1 2661176..2662441(+) (rarA) [Bacillus subtilis strain PRO53]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=732720 P5628_RS13985 WP_014480427.1 2661176..2662441(+) (rarA) [Bacillus subtilis strain PRO53]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993