Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   N6G78_RS07690 Genome accession   NZ_CP104855
Coordinates   1457091..1457666 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain TY-1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1452091..1462666
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N6G78_RS07660 (N6G78_07660) dapD 1452279..1452989 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  N6G78_RS07665 (N6G78_07665) dapI 1453059..1454183 (+) 1125 WP_015383541.1 N-acetyldiaminopimelate deacetylase -
  N6G78_RS07670 (N6G78_07670) ykuS 1454245..1454490 (+) 246 WP_003232382.1 YkuS family protein -
  N6G78_RS07675 (N6G78_07675) mscT 1454527..1455330 (-) 804 WP_041517839.1 small-conductance mechanosensitive channel protein MscT -
  N6G78_RS07680 (N6G78_07680) ahpA 1455567..1456109 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  N6G78_RS07685 (N6G78_07685) ykuV 1456179..1456625 (+) 447 WP_015483177.1 thiol-disulfide oxidoreductase YkuV -
  N6G78_RS07690 (N6G78_07690) rok 1457091..1457666 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  N6G78_RS07695 (N6G78_07695) cse15 1457707..1458672 (-) 966 WP_015383544.1 spore protein Cse15 -
  N6G78_RS07700 (N6G78_07700) mobA 1458809..1459408 (+) 600 WP_015383545.1 molybdenum cofactor guanylyltransferase -
  N6G78_RS07705 (N6G78_07705) moeB 1459459..1460478 (+) 1020 WP_015383546.1 molybdopterin-synthase adenylyltransferase MoeB -
  N6G78_RS07710 (N6G78_07710) glp 1460496..1461788 (+) 1293 WP_015383547.1 gephyrin-like molybdotransferase Glp -
  N6G78_RS07715 (N6G78_07715) mobB 1461749..1462270 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=732695 N6G78_RS07690 WP_003232378.1 1457091..1457666(+) (rok) [Bacillus subtilis strain TY-1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=732695 N6G78_RS07690 WP_003232378.1 1457091..1457666(+) (rok) [Bacillus subtilis strain TY-1]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1