Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   N6G78_RS07590 Genome accession   NZ_CP104855
Coordinates   1441206..1441670 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain TY-1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1436206..1446670
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N6G78_RS07570 (N6G78_07570) kinA 1436673..1438493 (+) 1821 WP_015483173.1 sporulation histidine kinase KinA -
  N6G78_RS07575 (N6G78_07575) dapX 1438503..1439684 (-) 1182 WP_015252196.1 aminotransferase A -
  N6G78_RS07580 (N6G78_07580) - 1439886..1440047 (-) 162 WP_003245246.1 hypothetical protein -
  N6G78_RS07585 (N6G78_07585) cheV 1440251..1441162 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  N6G78_RS07590 (N6G78_07590) kre 1441206..1441670 (-) 465 WP_003232406.1 YkyB family protein Regulator
  N6G78_RS07595 (N6G78_07595) ykuC 1441796..1443088 (-) 1293 WP_014479656.1 MFS transporter -
  N6G78_RS07600 (N6G78_07600) ltdD 1443164..1443658 (-) 495 WP_080030726.1 L,D-transpeptidase family protein -
  N6G78_RS07605 (N6G78_07605) ppeE 1443715..1444575 (-) 861 WP_015483175.1 metallophosphoesterase -
  N6G78_RS07610 (N6G78_07610) fadH 1444718..1445482 (+) 765 WP_015383534.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=732694 N6G78_RS07590 WP_003232406.1 1441206..1441670(-) (kre) [Bacillus subtilis strain TY-1]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=732694 N6G78_RS07590 WP_003232406.1 1441206..1441670(-) (kre) [Bacillus subtilis strain TY-1]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1