Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   P5628_RS05320 Genome accession   NZ_CP120577
Coordinates   1026957..1027700 (+) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis strain PRO53     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1021957..1032700
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5628_RS05285 (P5628_05285) yhaI 1022288..1022629 (+) 342 WP_009966921.1 YhaI family protein -
  P5628_RS05290 (P5628_05290) scoC 1022626..1023237 (-) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  P5628_RS05295 (P5628_05295) yhaH 1023415..1023771 (-) 357 WP_003245875.1 YtxH domain-containing protein -
  P5628_RS05300 (P5628_05300) - 1023900..1024091 (+) 192 WP_014476318.1 hypothetical protein -
  P5628_RS05305 (P5628_05305) trpP 1024164..1024682 (-) 519 WP_003233236.1 tryptophan transporter TrpP -
  P5628_RS05310 (P5628_05310) serC 1024807..1025886 (-) 1080 WP_072175684.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  P5628_RS05315 (P5628_05315) hinT 1026033..1026470 (-) 438 WP_003233231.1 HIT family protein -
  P5628_RS05320 (P5628_05320) pptA 1026957..1027700 (+) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  P5628_RS05325 (P5628_05325) ecsB 1027693..1028919 (+) 1227 WP_277709378.1 ABC transporter permease EcsB -
  P5628_RS05330 (P5628_05330) ecsC 1028939..1029649 (+) 711 WP_021479638.1 EcsC family protein -
  P5628_RS05335 (P5628_05335) sndC 1029667..1030857 (-) 1191 WP_277709379.1 N-acetyl amino acid acetylase SndC -
  P5628_RS05340 (P5628_05340) - 1030929..1032320 (-) 1392 WP_072173863.1 hypothetical protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=732649 P5628_RS05320 WP_003233230.1 1026957..1027700(+) (pptA) [Bacillus subtilis strain PRO53]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=732649 P5628_RS05320 WP_003233230.1 1026957..1027700(+) (pptA) [Bacillus subtilis strain PRO53]
ATGTCTCTGCTATCGGTAAAAGACTTAACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGCTTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACATATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTTTTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCAAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGTTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547