Detailed information NTG0732607

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: P5711_RS22645
• Genome accession: NZ_CP120568
• Coordinates: 4627787..4628812 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 582
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4622787..4633812

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5711_RS22625 (P5711_22625)	metJ	4623848..4624165 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
P5711_RS22630 (P5711_22630)	yiiX	4624349..4624957 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
P5711_RS22635 (P5711_22635)	rpmE	4625018..4625230 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
P5711_RS22640 (P5711_22640)	priA	4625433..4627631 (+)	2199	WP_277686113.1	primosomal protein N'	Machinery gene
P5711_RS22645 (P5711_22645)	cytR	4627787..4628812 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
P5711_RS22650 (P5711_22650)	ftsN	4628904..4629863 (+)	960	WP_000068828.1	cell division protein FtsN	-
P5711_RS22655 (P5711_22655)	hslV	4629956..4630486 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
P5711_RS22660 (P5711_22660)	hslU	4630496..4631827 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
P5711_RS22665 (P5711_22665)	menA	4631894..4632820 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
P5711_RS22670 (P5711_22670)	rraA	4632913..4633398 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
P5711_RS22675 (P5711_22675)	zapB	4633483..4633728 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=732607 P5711_RS22645 WP_000644904.1 4627787..4628812(+) (cytR) [Escherichia coli strain 582]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=732607 P5711_RS22645 WP_000644904.1 4627787..4628812(+) (cytR) [Escherichia coli strain 582]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628