Detailed information    

insolico Bioinformatically predicted

Overview

Name   kpsS   Type   Regulator
Locus tag   P5707_RS05140 Genome accession   NZ_CP120567
Coordinates   1071141..1072400 (-) Length   419 a.a.
NCBI ID   WP_001161827.1    Uniprot ID   A0A0H3ELU3
Organism   Escherichia coli strain A0 34/86     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1066141..1077400
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5707_RS05125 (P5707_05125) - 1067127..1068284 (+) 1158 WP_000199920.1 hypothetical protein -
  P5707_RS05130 (P5707_05130) - 1068674..1069657 (+) 984 WP_225377620.1 hypothetical protein -
  P5707_RS05135 (P5707_05135) - 1069806..1071014 (+) 1209 WP_112065070.1 IS256-like element ISEc39 family transposase -
  P5707_RS05140 (P5707_05140) kpsS 1071141..1072400 (-) 1260 WP_001161827.1 capsular biosynthesis protein Regulator
  P5707_RS05145 (P5707_05145) - 1072435..1074462 (-) 2028 WP_033561236.1 capsular polysaccharide biosynthesis protein -
  P5707_RS05150 (P5707_05150) kdsB 1074459..1075199 (-) 741 WP_000030758.1 3-deoxy-manno-octulosonate cytidylyltransferase -
  P5707_RS05155 (P5707_05155) - 1075209..1076885 (-) 1677 WP_001298258.1 polysaccharide biosynthesis/export family protein -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 49880.43 Da        Isoelectric Point: 10.0395

>NTDB_id=732479 P5707_RS05140 WP_001161827.1 1071141..1072400(-) (kpsS) [Escherichia coli strain A0 34/86]
MQGNALTILLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRNRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWATSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKDSYLVIKHHPMDRGHRLYRPLIKRLSKEYGLDERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLVKTQVNGVYYGEMIFNKIKLD
KDFRNFSHQVGNTKANNTE

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=732479 P5707_RS05140 WP_001161827.1 1071141..1072400(-) (kpsS) [Escherichia coli strain A0 34/86]
ATGCAAGGCAACGCACTAACTATTTTATTATCGGGTAAAAAATATCTGCTATTGCAGGGACCGATGGGACCTTTTTTCAA
CGACGTTGCCGAATGGTTAGAGTCATTAGGCCGTAACGCTGTGAATGTTGTATTCAACGGTGGTGATCGTTTTTACTGCC
GCAATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTCCCCGGTTGGTTGCGAGATCTCCACCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCATAAAGAAGCAAAACGCTGGGCAACGTCGAAAGGGATCCG
CTTTCTGGCATTTGAGGAAGGATATTTACGCCCGCAATTTATTACCGTTGAAGAAGGCGGAGTAAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGCATTGGCCATGCGATGTGGTATTACCTGATGGGCTGGCATTACCGTCATGAGTTCCCTCGCTACCGCCACCACAA
ATCATTTTCCCCCTGGTATGAAGCTCGTTGCTGGGTTCGTGCGTACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AAGTATTGCCGCGGTTAATGAATGAGCTGGATCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGAGATTATATTAATGAAGTCATGTACTCATTTTCGCGTAAAGCGCCAAAAGA
CAGTTATTTGGTGATCAAACATCATCCGATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGATTGAGTAAGG
AATATGGCTTAGATGAGCGAGTCATTTATGTGCACGATCTCCCGATGCCGGAATTATTACGCCATGCAAAAGCGGTAGTG
ACGATTAACAGTACGGCGGGGATCTCTGCGCTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAAGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGTGGGTATTTATTGGTTAAGACGCAGGTTAATGGGGTTTATTATGGGGAGATGATTTTTAACAAGATAAAACTGGAT
AAAGATTTTCGGAATTTTTCGCATCAAGTAGGAAATACAAAAGCAAATAATACAGAATAG

Domains

Predicted by InterProScan.

Capsule polysaccharide biosynthesis protein (Capsule_synth)

(83-389)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3ELU3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

39.394

94.511

0.372