Detailed information NTG0732471

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: P5707_RS03230
• Genome accession: NZ_CP120567
• Coordinates: 662346..663371 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644911.1
• Uniprot ID: -
• Organism: Escherichia coli strain A0 34/86
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 657346..668371

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5707_RS03200 (P5707_03200)	zapB	657430..657675 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
P5707_RS03205 (P5707_03205)	rraA	657760..658245 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
P5707_RS03210 (P5707_03210)	menA	658338..659264 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
P5707_RS03215 (P5707_03215)	hslU	659331..660662 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
P5707_RS03220 (P5707_03220)	hslV	660672..661202 (-)	531	WP_000208235.1	ATP-dependent protease subunit HslV	-
P5707_RS03225 (P5707_03225)	ftsN	661295..662254 (-)	960	WP_000068846.1	cell division protein FtsN	-
P5707_RS03230 (P5707_03230)	cytR	662346..663371 (-)	1026	WP_000644911.1	DNA-binding transcriptional regulator CytR	Regulator
P5707_RS03235 (P5707_03235)	priA	663527..665725 (-)	2199	WP_021521149.1	primosomal protein N'	Machinery gene
P5707_RS03240 (P5707_03240)	rpmE	665928..666140 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
P5707_RS03245 (P5707_03245)	yiiX	666201..666809 (-)	609	WP_000702296.1	YiiX family permuted papain-like enzyme	-
P5707_RS03250 (P5707_03250)	metJ	666869..667186 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37805.71 Da
• Isoelectric Point: 6.1617

>NTDB_id=732471 P5707_RS03230 WP_000644911.1 662346..663371(-) (cytR) [Escherichia coli strain A0 34/86]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHNRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=732471 P5707_RS03230 WP_000644911.1 662346..663371(-) (cytR) [Escherichia coli strain A0 34/86]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAATCGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625