Detailed information NTG0732268

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: P5710_RS23445
• Genome accession: NZ_CP120549
• Coordinates: 4856303..4857328 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain B1172
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4851303..4862328

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5710_RS23425 (P5710_23425)	metJ	4852488..4852805 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
P5710_RS23430 (P5710_23430)	yiiX	4852865..4853473 (+)	609	WP_000702302.1	YiiX family permuted papain-like enzyme	-
P5710_RS23435 (P5710_23435)	rpmE	4853534..4853746 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
P5710_RS23440 (P5710_23440)	priA	4853949..4856147 (+)	2199	WP_001340148.1	primosomal protein N'	Machinery gene
P5710_RS23445 (P5710_23445)	cytR	4856303..4857328 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
P5710_RS23450 (P5710_23450)	ftsN	4857420..4858379 (+)	960	WP_000068847.1	cell division protein FtsN	-
P5710_RS23455 (P5710_23455)	hslV	4858472..4859002 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
P5710_RS23460 (P5710_23460)	hslU	4859012..4860343 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
P5710_RS23465 (P5710_23465)	menA	4860410..4861336 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
P5710_RS23470 (P5710_23470)	rraA	4861429..4861914 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
P5710_RS23475 (P5710_23475)	zapB	4861999..4862244 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=732268 P5710_RS23445 WP_000644904.1 4856303..4857328(+) (cytR) [Escherichia coli strain B1172]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=732268 P5710_RS23445 WP_000644904.1 4856303..4857328(+) (cytR) [Escherichia coli strain B1172]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628