Detailed information    

insolico Bioinformatically predicted

Overview

Name   hns   Type   Regulator
Locus tag   N5P13_RS01355 Genome accession   NZ_CP104736
Coordinates   288962..289288 (+) Length   108 a.a.
NCBI ID   WP_004920639.1    Uniprot ID   A0A7G2SG96
Organism   Acinetobacter baylyi strain JAT2091     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 283962..294288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N5P13_RS01330 (N5P13_01330) hemC 284561..285481 (+) 921 WP_004920652.1 hydroxymethylbilane synthase -
  N5P13_RS01335 (N5P13_01335) - 285488..286258 (+) 771 WP_004920650.1 uroporphyrinogen-III synthase -
  N5P13_RS01340 (N5P13_01340) - 286333..287097 (+) 765 WP_227499415.1 hypothetical protein -
  N5P13_RS01345 (N5P13_01345) - 287113..288306 (+) 1194 WP_004920644.1 hypothetical protein -
  N5P13_RS01350 (N5P13_01350) - 288315..288755 (+) 441 WP_004920640.1 acyl-CoA thioesterase -
  N5P13_RS01355 (N5P13_01355) hns 288962..289288 (+) 327 WP_004920639.1 H-NS family nucleoid-associated regulatory protein Regulator
  N5P13_RS01360 (N5P13_01360) gspN 289451..290194 (+) 744 WP_004920637.1 type II secretion system protein N -
  N5P13_RS01365 (N5P13_01365) - 290194..291039 (+) 846 WP_004920634.1 type II secretion system protein N -
  N5P13_RS01370 (N5P13_01370) gspD 291080..293398 (+) 2319 WP_004920631.1 type II secretion system secretin GspD -
  N5P13_RS01375 (N5P13_01375) - 293468..294121 (+) 654 WP_004920630.1 FHA domain-containing protein -

Sequence

Protein


Download         Length: 108 a.a.        Molecular weight: 12531.18 Da        Isoelectric Point: 5.3445

>NTDB_id=731725 N5P13_RS01355 WP_004920639.1 288962..289288(+) (hns) [Acinetobacter baylyi strain JAT2091]
MKPDISELSVEELKRLQEEAEALIATKKDQAIEDAYNQLLEVAENVGYTVEQLLEYGAQKRKKTTRKSVEPRYRNKHNAE
ETWTGRGKQPRWLVAELEKGAKLEDFLI

Nucleotide


Download         Length: 327 bp        

>NTDB_id=731725 N5P13_RS01355 WP_004920639.1 288962..289288(+) (hns) [Acinetobacter baylyi strain JAT2091]
ATGAAACCAGATATTAGTGAGCTATCAGTAGAAGAGTTGAAACGTTTGCAAGAAGAAGCAGAAGCTTTAATTGCGACGAA
AAAAGATCAGGCAATTGAAGATGCGTATAATCAATTACTTGAAGTTGCAGAAAATGTAGGTTATACCGTTGAACAGCTAC
TTGAATATGGTGCTCAAAAACGTAAAAAAACAACACGTAAATCTGTTGAGCCACGTTACCGCAATAAACACAATGCTGAA
GAAACCTGGACAGGTCGTGGTAAGCAACCACGCTGGTTAGTTGCTGAACTTGAAAAAGGTGCAAAATTAGAAGATTTCCT
GATCTAA

Domains

Predicted by InterproScan.

H-NS histone family (Histone_HNS)

(12-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G2SG96

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

91.667

100

0.917