Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   N5P16_RS15150 Genome accession   NZ_CP104734
Coordinates   3251559..3255872 (-) Length   1437 a.a.
NCBI ID   WP_004922362.1    Uniprot ID   Q6FE15
Organism   Acinetobacter baylyi strain JAT2044     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 3246559..3260872
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N5P16_RS15090 (N5P16_15090) - 3246590..3247054 (-) 465 WP_004922344.1 DUF2750 domain-containing protein -
  N5P16_RS15125 (N5P16_15125) elsL 3248078..3248581 (-) 504 WP_004922347.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  N5P16_RS15130 (N5P16_15130) - 3248574..3248987 (-) 414 WP_004922350.1 YbaN family protein -
  N5P16_RS15135 (N5P16_15135) - 3249130..3249990 (+) 861 WP_004922354.1 DUF1853 family protein -
  N5P16_RS15140 (N5P16_15140) - 3250134..3250277 (+) 144 WP_011182135.1 entericidin A/B family lipoprotein -
  N5P16_RS15145 (N5P16_15145) dapE 3250396..3251529 (+) 1134 WP_004922360.1 succinyl-diaminopimelate desuccinylase -
  N5P16_RS15150 (N5P16_15150) chpA 3251559..3255872 (-) 4314 WP_004922362.1 Hpt domain-containing protein Regulator
  N5P16_RS15155 (N5P16_15155) - 3255957..3257390 (-) 1434 WP_004922366.1 hypothetical protein -
  N5P16_RS15160 (N5P16_15160) - 3257433..3257951 (-) 519 WP_004922368.1 chemotaxis protein CheW -
  N5P16_RS15165 (N5P16_15165) - 3257955..3258326 (-) 372 WP_004922371.1 response regulator -
  N5P16_RS15170 (N5P16_15170) pilG 3258350..3258733 (-) 384 WP_004922374.1 twitching motility response regulator PilG Regulator
  N5P16_RS15175 (N5P16_15175) - 3258986..3259630 (+) 645 WP_004922377.1 hypothetical protein -
  N5P16_RS15180 (N5P16_15180) - 3259687..3260796 (+) 1110 WP_004922380.1 efflux RND transporter periplasmic adaptor subunit -

Sequence


Protein


Download         Length: 1437 a.a.        Molecular weight: 164200.05 Da        Isoelectric Point: 4.6578

>NTDB_id=731710 N5P16_RS15150 WP_004922362.1 3251559..3255872(-) (chpA) [Acinetobacter baylyi strain JAT2044]
MDAQVNHLIETIELPEDHYLDQDQEILEVFIEELEEVFNALDTLLQQWQMHPDDMPLIHEVCRHFNNLKGTGRMVGANAS
SEIAWIVEETLTRVMNALLPFSQLLLDFVYCIFKLYQDDLINDFKQLKPHEIDLRPYALIGQQLQFEQQILPALLSYVYP
NTIVITAQPDISLVSDHPSRVELSESLNIFLDEISVYVQDITFFLNQSHPDDEDHNRVLRALHTIRGSSSMAEIMPLFEV
SSTVESMIKQVLLHHAKLTVLELKLLRDYQQFIAQAIELIRQDPSLQKLQQQVHQFELSCQHYQAQIVQIAEKEQQQAVG
IVAHLLELGIDELLDAEFEFEVRISHEASEYIARLNEQAALLHSHTDTQRTRFLHNFSGSLQHIYQDLLSTACTDFPASL
RHAFQRAHEAMISLFDALAAVQHMTVFASYQTILDVLVNEVFQYKQAQCINAEREVLQHADNAYNIAEPVTSQLSSYLAL
DRQQDSVIALSIDPILLEIFLEESEELLASIDAEFSIWTNQPDHTDPLQHLIRFLHTLKGGANMVQLTHIGLIAHELETI
YQRLIYQQLHVSESLIKIMRMVQDELAERIQQLHHQSDDYPSSHVLDVLQHIEDWIDPSVISTVSSESMPDEQPSMDFDA
DQDMGLKQILELKPLLSDEVDTPQSLVENMFLEEAAELLQLAEISLQQWIKQRDQRHILLELQRIFHRLTRSARLLELKF
VVDMATCLEITFERISLHNFKTSAHDAVLQHAIQWLNAAIFDGEYADYHILKQKLEQLEFIEPLFPVPIEQLLTLTTPQP
AFSVSGDGVEPPSMHGEWENVLPVDETNDMIRVSSDLIEKMIDLSGENTINRSRIHMDMGHFDSILGDMELAIQRLSGQL
KQLDKELESQSLQTVDVFKVHRFAREQTSNLQQLSKSLTESASDLLDFKSSLTEKIRDTESLLLQQSRIQAELQENLIRT
RLVPFAQLLPRLQRTVRQAATTLNRPTQLLVHNTEGELDRSILERLVMPLEHMLRNAVDHGIEDPLTRIKQGKPSIGTIE
LSIRRHGTDVLLTLKDDGRGIDLEHVRQKAQLLGYLQPNQISDEQELLQYIFYPGFSTASQLTQLSGRGVGLDIVQNEIK
TLGGKITVSSVYGTGTSFTIRVPTTVAVSDALMVKVNDQQFALPLGKIERIVRLSPLILEQYFNSQTDRFEFENRAYKLR
YLGEFVDDILVPDWSKASSEWPVLLINAHTGQQVALLVDQVVGSRGQIVVKPIGQQFTQIKMVAGATILGDGQVCLILDP
LNIAQQVYSKPRHVHDLIEELGTREDRSLIMVVDDSVTVRKVTSRLLERQGYDVVTAKDGQDALEQLEHIRPSLILLDIE
MPQMDGFELTRYIRQHSILNSLPIIMITSRTGEKYREIAQQLGVDDYMGKPFQEDDLLTKIQNLLAQNKAIKHSQNQ

Nucleotide


Download         Length: 4314 bp        

>NTDB_id=731710 N5P16_RS15150 WP_004922362.1 3251559..3255872(-) (chpA) [Acinetobacter baylyi strain JAT2044]
ATGGATGCACAAGTAAATCATCTTATAGAGACGATTGAATTACCTGAAGATCATTATCTGGATCAAGATCAGGAAATTCT
GGAAGTCTTTATTGAAGAGTTGGAAGAAGTATTCAATGCACTGGATACTTTGCTTCAGCAATGGCAAATGCATCCTGATG
ATATGCCACTGATTCATGAGGTCTGTCGTCATTTTAACAATCTTAAAGGCACTGGCCGAATGGTAGGTGCCAATGCATCC
AGTGAAATTGCTTGGATTGTTGAAGAAACCTTGACTCGAGTCATGAATGCATTATTGCCATTCAGTCAGCTTTTACTGGA
TTTTGTATATTGTATTTTTAAGCTGTATCAAGACGATCTGATTAATGATTTTAAACAGCTAAAACCGCATGAGATTGATT
TAAGACCTTATGCCTTGATCGGGCAGCAATTACAATTTGAACAACAAATTTTACCTGCACTACTGTCATATGTATATCCG
AACACTATTGTAATTACAGCGCAACCTGATATTTCTTTGGTGTCAGACCATCCATCTAGAGTTGAACTTTCAGAATCTTT
AAATATCTTTCTAGATGAGATATCCGTCTATGTGCAAGATATTACGTTTTTTCTCAATCAGTCTCATCCCGATGACGAGG
ATCATAACCGCGTTTTAAGAGCATTACATACTATACGTGGGAGCTCATCAATGGCCGAAATTATGCCATTGTTTGAGGTC
AGTAGTACGGTTGAGTCGATGATTAAACAAGTGCTGTTGCATCATGCCAAATTGACTGTACTTGAACTGAAGTTGCTTCG
AGACTATCAGCAGTTTATTGCTCAGGCGATTGAGCTAATCCGTCAGGATCCATCATTACAAAAATTGCAACAACAAGTAC
ATCAGTTTGAATTGAGTTGCCAACATTACCAAGCTCAGATCGTACAGATCGCCGAAAAAGAACAGCAGCAAGCTGTGGGA
ATTGTGGCGCACTTACTTGAATTGGGAATTGATGAATTATTAGATGCCGAGTTTGAGTTTGAGGTAAGAATCTCTCATGA
GGCTAGCGAATATATCGCAAGGTTAAATGAGCAGGCGGCACTGCTACATAGCCATACTGATACTCAGCGAACGCGTTTTT
TGCATAATTTTAGTGGCAGCTTACAACATATTTATCAAGACTTACTCAGTACAGCATGTACCGATTTTCCTGCTTCATTA
CGTCATGCTTTTCAGCGCGCTCATGAGGCCATGATTAGTTTATTTGATGCTTTGGCAGCAGTGCAACACATGACTGTTTT
TGCATCTTATCAGACGATACTTGATGTACTGGTCAATGAGGTATTTCAATATAAACAAGCTCAATGTATAAATGCCGAAC
GTGAGGTTTTACAACATGCTGATAACGCTTATAACATTGCAGAACCAGTAACCAGTCAACTGTCATCATATCTTGCGCTT
GATCGTCAACAGGATTCAGTAATCGCTTTATCAATTGACCCGATATTACTTGAGATTTTTCTGGAAGAAAGTGAAGAATT
ATTAGCAAGCATCGATGCAGAATTTTCGATCTGGACAAATCAACCTGATCATACAGATCCCTTGCAGCATTTAATCCGGT
TTCTCCATACCTTAAAGGGTGGAGCCAATATGGTACAACTGACACATATTGGTCTGATTGCACATGAATTAGAAACAATT
TATCAGCGCCTGATTTATCAACAGCTTCACGTTTCAGAAAGCCTGATCAAGATTATGCGTATGGTGCAAGATGAGCTGGC
TGAACGTATTCAGCAATTACATCATCAGTCCGACGATTATCCGTCTAGCCATGTACTGGATGTGCTTCAGCATATCGAAG
ACTGGATTGATCCTTCAGTCATAAGTACGGTATCGTCTGAAAGTATGCCAGATGAACAGCCATCAATGGATTTTGATGCT
GATCAAGATATGGGACTTAAGCAGATACTCGAATTAAAACCATTGCTATCTGATGAGGTGGATACACCGCAAAGTTTGGT
CGAAAACATGTTTCTGGAAGAGGCGGCAGAGCTTTTGCAGCTTGCAGAGATCAGCTTGCAACAATGGATTAAGCAACGTG
ATCAACGGCACATTTTGCTTGAGCTACAACGCATATTTCATCGGCTAACACGAAGTGCTCGTTTACTCGAACTCAAGTTT
GTTGTGGATATGGCAACGTGTCTTGAAATTACATTTGAGCGAATCAGTTTACATAATTTTAAAACCTCAGCCCATGACGC
TGTACTCCAGCATGCAATACAGTGGTTAAATGCAGCGATATTTGATGGTGAATATGCTGACTATCATATCCTTAAGCAGA
AGCTCGAACAGCTTGAATTTATTGAACCACTTTTTCCAGTACCTATTGAGCAACTTTTAACGCTGACAACACCTCAGCCA
GCATTCTCAGTATCTGGTGACGGTGTCGAACCGCCTTCCATGCACGGTGAATGGGAAAATGTACTGCCGGTCGATGAAAC
CAATGACATGATTCGTGTGTCATCAGATCTGATTGAAAAAATGATAGATCTTTCTGGTGAAAATACGATTAATCGTTCGC
GCATACATATGGATATGGGGCACTTTGATAGCATACTTGGTGACATGGAGTTGGCTATTCAACGTTTATCTGGACAATTG
AAGCAGCTGGATAAAGAACTTGAAAGCCAGTCATTACAAACGGTTGATGTATTTAAAGTTCATCGATTTGCAAGGGAACA
AACTTCAAATTTACAACAGTTGTCTAAATCTCTGACCGAGTCTGCATCTGACTTACTCGATTTTAAAAGTAGCCTCACGG
AAAAAATTCGTGATACAGAAAGCTTATTACTACAACAATCCCGTATTCAGGCCGAATTGCAAGAAAATTTGATTCGTACC
CGTCTGGTGCCTTTTGCACAACTTTTGCCAAGATTGCAGCGTACTGTTCGGCAGGCTGCAACCACATTAAACCGTCCGAC
ACAATTGCTTGTACATAATACCGAAGGTGAACTGGATCGGAGTATTCTTGAACGACTGGTGATGCCACTCGAACATATGT
TACGTAATGCAGTCGATCATGGAATAGAAGATCCCTTAACGCGAATAAAACAGGGTAAGCCGTCTATAGGAACCATAGAA
CTGTCTATTCGCCGTCATGGTACGGATGTTTTACTTACATTAAAAGATGATGGTCGTGGTATTGATCTGGAGCATGTTCG
TCAAAAAGCACAGTTATTGGGATATCTTCAGCCTAATCAAATTTCAGATGAACAAGAATTATTGCAATATATTTTTTATC
CTGGCTTTTCAACTGCTTCTCAATTAACCCAGTTGTCTGGGCGAGGCGTAGGGCTGGATATTGTACAGAATGAAATTAAA
ACACTTGGCGGAAAAATTACGGTATCTTCCGTATATGGCACGGGAACCAGTTTCACTATTCGTGTACCCACGACAGTGGC
TGTGAGTGATGCCTTAATGGTTAAAGTCAATGATCAGCAGTTTGCATTACCTCTTGGAAAAATTGAACGTATTGTACGAT
TATCTCCACTTATTTTAGAACAATACTTTAATAGTCAAACAGACCGTTTTGAATTTGAAAATAGAGCCTATAAACTTCGT
TATTTAGGCGAATTTGTGGATGATATACTGGTTCCTGATTGGTCAAAAGCTTCTTCAGAATGGCCTGTTTTGCTGATTAA
TGCACATACAGGGCAGCAAGTCGCTTTACTGGTAGATCAGGTTGTGGGGTCTCGTGGTCAGATTGTCGTTAAACCCATTG
GACAACAATTTACCCAGATTAAAATGGTTGCTGGTGCAACTATTTTAGGGGATGGACAAGTCTGCCTCATTCTGGATCCT
TTAAATATTGCACAGCAGGTTTACAGTAAGCCAAGGCATGTACATGATTTAATAGAGGAGTTGGGAACACGAGAAGACCG
TTCACTGATCATGGTGGTAGATGACTCGGTCACTGTTCGTAAAGTAACATCCAGACTTTTAGAGCGTCAGGGTTATGATG
TCGTGACAGCAAAAGATGGGCAGGATGCACTTGAGCAGCTTGAACATATTCGTCCAAGTTTAATTTTGCTTGATATCGAA
ATGCCACAAATGGATGGTTTCGAGTTGACCCGATATATTCGCCAACATTCAATCTTAAACTCGCTACCTATTATTATGAT
TACTTCTCGAACAGGCGAAAAGTATCGGGAAATTGCGCAGCAGCTTGGTGTTGATGATTATATGGGTAAACCTTTTCAAG
AAGACGATTTACTTACAAAAATTCAAAACCTTCTAGCGCAAAATAAAGCGATTAAACATAGCCAAAACCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

47.246

100

0.495