Detailed information    

insolico Bioinformatically predicted

Overview

Name   comN   Type   Machinery gene
Locus tag   N5P16_RS03460 Genome accession   NZ_CP104734
Coordinates   764558..765196 (+) Length   212 a.a.
NCBI ID   WP_004923716.1    Uniprot ID   A0A7G2SB65
Organism   Acinetobacter baylyi strain JAT2044     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 759558..770196
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N5P16_RS03445 (N5P16_03445) - 759942..760763 (+) 822 WP_011182767.1 putative RNA methyltransferase -
  N5P16_RS03450 (N5P16_03450) ponA 760776..763334 (-) 2559 WP_004923711.1 penicillin-binding protein PBP1a -
  N5P16_RS03455 (N5P16_03455) comM 763500..764561 (+) 1062 WP_004923715.1 pilus assembly protein PilM Machinery gene
  N5P16_RS03460 (N5P16_03460) comN 764558..765196 (+) 639 WP_004923716.1 PilN domain-containing protein Machinery gene
  N5P16_RS03465 (N5P16_03465) comO 765193..765930 (+) 738 WP_004923719.1 type 4a pilus biogenesis protein PilO Machinery gene
  N5P16_RS03470 (N5P16_03470) comL 765930..766454 (+) 525 WP_004923726.1 pilus assembly protein PilP Machinery gene
  N5P16_RS03475 (N5P16_03475) comQ 766514..768643 (+) 2130 WP_004923730.1 type IV pilus secretin PilQ Machinery gene
  N5P16_RS03480 (N5P16_03480) aroK 768680..769222 (+) 543 WP_004923733.1 shikimate kinase AroK -

Sequence

Protein


Download         Length: 212 a.a.        Molecular weight: 23713.28 Da        Isoelectric Point: 9.6708

>NTDB_id=731687 N5P16_RS03460 WP_004923716.1 764558..765196(+) (comN) [Acinetobacter baylyi strain JAT2044]
MTKINLLPWRDKLREKRKKEFLVFSILVGLLGCAAVLMGWFYFGHKLNDQEQANQLILTTNQGLDQQLKSLDGLQQQRNA
IVERMKLIQGLQAQRPVTVRLIDELVRVTPSNMYLTKFTRTGDKFTIEGKAESPNTVAELLRNLEASAWYRNAFMNSFLA
AEDNKDKTPSSVVPRVEAGYGSFLVSVDLGELGTSLATSDQPQTPPTAGVKP

Nucleotide


Download         Length: 639 bp        

>NTDB_id=731687 N5P16_RS03460 WP_004923716.1 764558..765196(+) (comN) [Acinetobacter baylyi strain JAT2044]
ATGACAAAAATTAACCTGCTTCCGTGGCGAGATAAGCTGCGAGAAAAAAGAAAAAAAGAATTTCTGGTATTTAGCATATT
GGTTGGGTTGTTGGGTTGTGCTGCAGTATTAATGGGATGGTTCTATTTTGGGCATAAATTAAACGATCAGGAACAAGCAA
ATCAGCTCATCTTGACGACTAACCAAGGATTAGATCAACAATTAAAATCACTGGATGGCCTGCAACAGCAACGGAATGCC
ATTGTGGAGCGGATGAAACTCATTCAAGGTTTACAGGCTCAGCGACCAGTCACTGTTCGCCTTATTGATGAATTGGTACG
TGTTACTCCGAGCAATATGTATTTAACTAAATTTACCCGTACAGGCGATAAGTTTACCATTGAAGGTAAAGCTGAAAGTC
CGAATACTGTGGCCGAATTATTACGCAATCTTGAGGCATCAGCATGGTATCGAAATGCCTTTATGAACTCGTTTCTGGCA
GCAGAAGACAATAAGGATAAAACCCCAAGTTCTGTTGTGCCACGTGTCGAGGCGGGCTACGGCAGTTTCTTGGTGAGTGT
CGATCTTGGTGAGCTAGGAACTTCTCTCGCGACATCGGATCAACCTCAGACTCCACCTACTGCGGGAGTAAAACCATGA

Domains

Predicted by InterproScan.

Fimbrial assembly protein (PilN) (PilN)

(100-164)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G2SB65

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comN Acinetobacter baylyi ADP1

100

100

1
  pilN Acinetobacter baumannii D1279779

71.905

99.057

0.712