Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   N5P16_RS00110 Genome accession   NZ_CP104734
Coordinates   19141..21372 (+) Length   743 a.a.
NCBI ID   WP_004920370.1    Uniprot ID   A0A7G2SIP5
Organism   Acinetobacter baylyi strain JAT2044     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 14141..26372
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N5P16_RS00090 (N5P16_00090) lnt 14707..16266 (+) 1560 WP_004920357.1 apolipoprotein N-acyltransferase -
  N5P16_RS00095 (N5P16_00095) - 16682..17020 (-) 339 WP_004920361.1 hypothetical protein -
  N5P16_RS00100 (N5P16_00100) gspG 17284..17715 (-) 432 WP_343681850.1 type II secretion system major pseudopilin GspG -
  N5P16_RS00105 (N5P16_00105) gspF 17796..19001 (-) 1206 WP_004920366.1 type II secretion system inner membrane protein GspF -
  N5P16_RS00110 (N5P16_00110) priA 19141..21372 (+) 2232 WP_004920370.1 primosomal protein N' Machinery gene
  N5P16_RS00115 (N5P16_00115) - 21446..23290 (+) 1845 WP_004920372.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  N5P16_RS00120 (N5P16_00120) hslO 23341..24216 (+) 876 WP_004920374.1 Hsp33 family molecular chaperone HslO -
  N5P16_RS00125 (N5P16_00125) - 24419..25360 (+) 942 WP_004920377.1 DnaJ C-terminal domain-containing protein -
  N5P16_RS00130 (N5P16_00130) - 25372..25695 (+) 324 WP_004920380.1 chaperone modulator CbpM -
  N5P16_RS00135 (N5P16_00135) crcB 25803..26183 (-) 381 WP_004920383.1 fluoride efflux transporter CrcB -

Sequence

Protein


Download         Length: 743 a.a.        Molecular weight: 84718.85 Da        Isoelectric Point: 8.4572

>NTDB_id=731672 N5P16_RS00110 WP_004920370.1 19141..21372(+) (priA) [Acinetobacter baylyi strain JAT2044]
MPLTPPQPSTEIYRVRVAVPVHLYDTFDYSVSQQQYEQAQAGARVLVSFGRQSLIGVITEKLAPDLPIDPRFQLKTIREL
IDQAPILDTKVLTLLTWSAHYYQFPIGEVIQTALPSLLRQGKSQDVLTYIWKITAHPEAESKLKRSQKQYDAYQILKLHP
TGTTETILNLSGVETATLRALAKKELVACTQEIQDFTPMPVQLAQMPLTPNPDQHNAIQRVLKSLHHYQAFLLDGLTGSG
KTEVYLQIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFHCDVALLHSGLNDSKRLQAWQQAKMGKASIILGTRSAIYT
PLPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGYLEQCPVILGSATPSIDSYHLVEQNKLELLQLNQRAGVALLPKM
HLIDLKVAKKNEGLSQILIDQIQHTLDRQEQVLIFLNRRGYAPVLVCESCGWQANCPNCDAHFTLHTQPYGYLHCHHCGT
IHRLPETCPECHHHTLKTLGMGTAKVEEHLKTLFPEHDVIRVDRDSTSRVGSWQKIYDRIQHNKPMILLGTQMLAKGHHF
PYVTLVAILDIDAGLLSVDVRAPERTAQLIVQVAGRAGRGEHKGHVYMQTLRPDHPMLTTLIEKDYRAVAKDMLEERKAA
RLPPYRYSVLIRCESRDRDYSQAFLQEIAQMLQHQAGDSIEIWGPIPAPMERKAGRYRAHMVILAQDRARLHFFLRPWWA
EVIQLPRQHQLRLSIDVDPQEFN

Nucleotide


Download         Length: 2232 bp        

>NTDB_id=731672 N5P16_RS00110 WP_004920370.1 19141..21372(+) (priA) [Acinetobacter baylyi strain JAT2044]
ATGCCACTAACGCCACCCCAGCCTTCAACTGAAATTTATCGTGTTCGTGTGGCTGTTCCTGTGCATTTATACGATACTTT
CGACTATAGCGTAAGCCAGCAACAATATGAACAGGCACAAGCTGGCGCACGCGTACTGGTTTCATTTGGCAGACAATCAC
TGATTGGGGTAATTACTGAAAAACTCGCGCCAGATCTTCCCATAGACCCGCGTTTTCAATTAAAAACAATACGCGAACTG
ATCGATCAAGCGCCTATTTTAGATACCAAAGTTTTAACTTTATTGACATGGTCGGCACATTATTATCAATTTCCGATCGG
TGAAGTCATTCAGACAGCGCTTCCAAGTTTACTCAGACAAGGTAAATCTCAAGATGTTTTAACTTATATCTGGAAAATTA
CCGCACATCCAGAGGCCGAATCAAAATTAAAACGTTCACAAAAACAGTATGATGCCTATCAAATTTTAAAGCTTCATCCC
ACTGGAACGACAGAAACTATTTTAAACTTGAGTGGTGTAGAAACTGCAACCTTACGTGCACTGGCCAAAAAAGAATTGGT
TGCTTGTACACAGGAAATTCAAGACTTTACCCCGATGCCTGTGCAACTGGCACAAATGCCGCTCACACCCAATCCAGATC
AGCACAATGCAATCCAACGTGTATTAAAGTCCCTGCATCATTATCAGGCATTTTTGCTAGATGGCTTGACGGGTAGCGGC
AAAACGGAAGTCTATCTTCAGATCATGCATGAAGTCCTCAAGCAGGGAAAACAAGTGCTGGTGCTGGTTCCAGAGATTGG
ACTGACACCACAGACCATCTCACGTTTTAAATCCCGCTTTCATTGTGATGTTGCTTTATTACATTCTGGACTCAATGATT
CCAAACGATTACAGGCATGGCAACAAGCCAAAATGGGTAAAGCCTCGATTATTTTAGGAACACGCTCGGCCATTTATACG
CCATTACCACGACTGGGCTTAATTATTCTGGATGAAGAACATGATTTGTCTTATAAGCAACAGGAAGGTTTTCGCTATCA
TGCGCGAGACGTTGCCCTATATCGTGGTTATTTAGAACAATGCCCTGTAATATTAGGCTCGGCGACCCCCAGTATAGACA
GTTATCATCTGGTGGAACAAAATAAGCTTGAGCTACTCCAGCTCAATCAGCGTGCTGGTGTCGCGCTATTACCTAAAATG
CACCTGATCGATCTCAAGGTTGCCAAAAAGAATGAGGGACTCAGCCAGATTCTCATCGATCAGATTCAACACACACTGGA
TCGTCAGGAACAGGTGCTGATTTTTTTAAATCGACGTGGCTATGCGCCTGTTCTGGTCTGTGAAAGCTGTGGCTGGCAAG
CCAATTGTCCAAATTGCGATGCGCATTTCACATTACACACTCAGCCTTATGGTTATTTACATTGTCATCATTGTGGAACG
ATTCATCGTTTGCCCGAGACCTGTCCCGAATGTCATCATCACACCTTAAAAACGCTGGGCATGGGAACAGCAAAGGTGGA
AGAACATCTGAAAACACTGTTTCCTGAACACGATGTGATTCGAGTCGATCGTGACAGTACCAGTCGTGTCGGAAGCTGGC
AAAAAATCTATGACCGAATCCAGCACAATAAACCCATGATTCTGTTAGGCACACAAATGCTGGCCAAGGGGCATCATTTC
CCTTATGTAACGCTAGTGGCTATTCTGGATATTGATGCAGGGTTATTAAGTGTCGATGTTCGCGCACCTGAACGAACAGC
TCAATTAATTGTGCAGGTGGCAGGTCGTGCAGGTCGCGGTGAACATAAAGGTCATGTCTATATGCAAACCTTGCGTCCAG
ATCATCCGATGCTGACGACACTGATTGAAAAAGACTATCGGGCTGTGGCGAAAGATATGCTTGAAGAGCGAAAAGCAGCA
CGATTACCGCCTTATCGCTACAGTGTACTCATTCGATGTGAATCACGTGATCGGGATTATAGTCAGGCTTTCTTGCAAGA
GATTGCGCAGATGCTTCAGCATCAAGCGGGCGACAGTATAGAAATTTGGGGACCCATTCCTGCCCCGATGGAACGTAAAG
CAGGACGTTATCGGGCACATATGGTGATCTTGGCGCAAGATCGGGCGCGTCTACATTTCTTCTTGCGTCCATGGTGGGCT
GAGGTGATTCAACTCCCTCGTCAGCATCAATTACGTTTATCAATTGATGTTGATCCACAGGAATTTAACTGA

Domains

Predicted by InterproScan.

3DNA-binding domain (3BD) (PriA_3primeBD)

(16-115)

Type III restriction enzyme, res subunit (ResIII)

(209-371)

Primosomal protein N C-terminal domain (PriA_C)

(644-739)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G2SIP5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

79.81

99.327

0.793