Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   N5P26_RS07605 Genome accession   NZ_CP104724
Coordinates   1629941..1630567 (+) Length   208 a.a.
NCBI ID   WP_032637053.1    Uniprot ID   A0AAJ6MNH4
Organism   Enterobacter kobei strain SG.H2a     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1624941..1635567
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N5P26_RS07585 (N5P26_07585) - 1625339..1627099 (-) 1761 WP_045134653.1 AAA family ATPase -
  N5P26_RS07590 (N5P26_07590) matP 1627286..1627738 (+) 453 WP_023332611.1 macrodomain Ter protein MatP -
  N5P26_RS07595 (N5P26_07595) ompA 1627803..1628858 (-) 1056 WP_014883252.1 porin OmpA -
  N5P26_RS07600 (N5P26_07600) sulA 1629214..1629723 (-) 510 WP_014883253.1 SOS-induced cell division inhibitor SulA -
  N5P26_RS07605 (N5P26_07605) sxy/tfoX 1629941..1630567 (+) 627 WP_032637053.1 TfoX/Sxy family DNA transformation protein Regulator
  N5P26_RS07610 (N5P26_07610) yccS 1630524..1632686 (-) 2163 WP_023332614.1 YccS family putative transporter -
  N5P26_RS07615 (N5P26_07615) - 1632706..1633152 (-) 447 WP_014883256.1 YccF domain-containing protein -
  N5P26_RS07620 (N5P26_07620) helD 1633276..1635330 (+) 2055 WP_045281285.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23930.53 Da        Isoelectric Point: 9.0691

>NTDB_id=731563 N5P26_RS07605 WP_032637053.1 1629941..1630567(+) (sxy/tfoX) [Enterobacter kobei strain SG.H2a]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAIDDAVFAMVSDGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALNAARKERCQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARECWLKMRAKN
RALGIKVLFALEGAIEGLHEAALPAGTRRELTEWFNALPEPQKNHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=731563 N5P26_RS07605 WP_032637053.1 1629941..1630567(+) (sxy/tfoX) [Enterobacter kobei strain SG.H2a]
ATGAAAAAGATATCTTATGAACGGATTTATCAATCCCAGGAATACCTCTCACCGCTAGGAGAAATTCATCATCGCGCACT
GTTCGGTGGCTATACCCTGGCGATAGATGACGCGGTTTTTGCCATGGTGTCAGATGGCGAGCTGTACCTTCGCGCCTGTG
AAGAAAGCGCGAAATACTGTGTAAAAAATGCCGCCTCTTTTTTGACGTTAATGAAACGAGGCCGCCCGGTACTTCTCAAC
TATTACCGTGTCGATGATGGACTGTGGCAAGACAGGGAACGGCTGCTTCAGCTCTCCTCTTTCGCGCTCAATGCGGCGAG
GAAAGAGCGCTGTCAGCGCCATCAACGAAACCGGCTTAAAGATCTGCCAAACCTGACCTTTCAGCTTGAGGTATTACTTT
TTGAAGCTGGCATTACTAACGAAGAGACGCTGCGGGCACTGGGTGCCAGGGAGTGCTGGTTAAAGATGCGGGCTAAAAAT
AGGGCACTCGGTATTAAAGTGCTCTTCGCCCTTGAGGGGGCTATTGAGGGTTTGCATGAGGCGGCACTCCCGGCAGGCAC
TCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGAAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

57.143

97.596

0.558