Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   P3U76_RS10935 Genome accession   NZ_CP120118
Coordinates   2175054..2175524 (+) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain Dog100     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2170054..2180524
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3U76_RS10915 (P3U76_10915) coaW 2170363..2171166 (+) 804 WP_072497587.1 type II pantothenate kinase -
  P3U76_RS10920 (P3U76_10920) - 2171296..2171967 (-) 672 WP_072497586.1 DUF2750 domain-containing protein -
  P3U76_RS10925 (P3U76_10925) ldmS 2172366..2173559 (-) 1194 WP_072497585.1 L-aspartate--L-methionine ligase LdmS -
  P3U76_RS10930 (P3U76_10930) - 2173559..2174743 (-) 1185 WP_001291497.1 M20 family metallopeptidase -
  P3U76_RS10935 (P3U76_10935) luxS 2175054..2175524 (+) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  P3U76_RS10940 (P3U76_10940) - 2175676..2176026 (-) 351 WP_001024035.1 membrane protein -
  P3U76_RS10945 (P3U76_10945) - 2176040..2177341 (-) 1302 WP_001242311.1 pyrimidine-nucleoside phosphorylase -
  P3U76_RS10950 (P3U76_10950) deoC 2177620..2178282 (-) 663 WP_062911928.1 deoxyribose-phosphate aldolase -
  P3U76_RS10955 (P3U76_10955) deoD 2178597..2179307 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  P3U76_RS10960 (P3U76_10960) - 2179428..2179871 (-) 444 WP_000070866.1 Dps family protein -
  P3U76_RS10965 (P3U76_10965) - 2180071..2180484 (-) 414 WP_001123303.1 thiol-disulfide oxidoreductase DCC family protein -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=730695 P3U76_RS10935 WP_000164421.1 2175054..2175524(+) (luxS) [Staphylococcus aureus strain Dog100]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=730695 P3U76_RS10935 WP_000164421.1 2175054..2175524(+) (luxS) [Staphylococcus aureus strain Dog100]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCCG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65329

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404