Detailed information NTG0730456

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: N5E84_RS14510
• Genome accession: NZ_CP104554
• Coordinates: 3119298..3120305 (+)
• Length: 335 a.a.
• NCBI ID: WP_017043195.1
• Uniprot ID: A0AAW8GSK0
• Organism: Vibrio sp. J502
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3114298..3125305

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N5E84_RS14490 (N5E84_14490)	metJ	3114349..3114675 (+)	327	WP_010318342.1	met regulon transcriptional regulator MetJ	-
N5E84_RS14495 (N5E84_14495)	-	3114824..3116101 (-)	1278	WP_026027888.1	malic enzyme-like NAD(P)-binding protein	-
N5E84_RS14500 (N5E84_14500)	rpmE	3116307..3116522 (-)	216	WP_010318344.1	50S ribosomal protein L31	-
N5E84_RS14505 (N5E84_14505)	priA	3116791..3118992 (+)	2202	WP_019282912.1	primosomal protein N'	-
N5E84_RS14510 (N5E84_14510)	cytR	3119298..3120305 (+)	1008	WP_017043195.1	DNA-binding transcriptional regulator CytR	Regulator
N5E84_RS14515 (N5E84_14515)	-	3120408..3120950 (+)	543	WP_013855850.1	SPOR domain-containing protein	-
N5E84_RS14520 (N5E84_14520)	hslV	3121071..3121637 (+)	567	WP_017046778.1	ATP-dependent protease subunit HslV	-
N5E84_RS14525 (N5E84_14525)	hslU	3121673..3123004 (+)	1332	WP_013855851.1	HslU--HslV peptidase ATPase subunit	-
N5E84_RS14530 (N5E84_14530)	-	3123127..3124044 (+)	918	WP_019282911.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
N5E84_RS14535 (N5E84_14535)	rraA	3124121..3124642 (+)	522	WP_026027418.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36770.41 Da
• Isoelectric Point: 6.6397

>NTDB_id=730456 N5E84_RS14510 WP_017043195.1 3119298..3120305(+) (cytR) [Vibrio sp. J502]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPAEATLCKFRHQGYQQALRRAGITMNPNYCTYGDFTFEAGAKALRQLLALSEPPTA
IFSHNDSMAIGVIKEAKKLGLRVPQDISVVGFDDIQFALYCDPPLTTISQPRYEIGRQAMLMMLDLLRGQEVGAGSRLLE
TKLVIRESAAPPRLS

Nucleotide

• Length: 1008 bp

>NTDB_id=730456 N5E84_RS14510 WP_017043195.1 3119298..3120305(+) (cytR) [Vibrio sp. J502]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGTGTATCAACCGCCACGGTATCTAGGGCGTTGATGAACCCTGAAAA
AGTATCATCTTCAACGCGAAAGCGTGTCGAAGATGCTGTTTTGGAAGCTGGTTACTCACCAAATTCTCTCGCTCGCAACT
TACGCCGTAATGAATCTAAAACCATTGTCGCTATCGTGCCTGATATTTGTGACCCTTACTTCACAGAGATCATTCGTGGT
ATCGAAGATGCGGCGATGGAACATGGTTATTTAGTACTGTTGGGTGATAGTGGTCAGCAGAAAAAGCGAGAAAGTTCGTT
AGTTAACCTCGTATTTACTAAGCAGGCCGATGGCATGTTGTTGCTGGGAACGGATTTGCCGTTTGATGTTAGTAAGCCGG
AGCAAAAAAACCTGCCACCTATGGTCATGGCATGTGAATTTGCGCCAGAACTTGAGTTGCCGACGGTACATATTGATAAC
CTTACTTCAGCGTTTGAAGCGGTGAACTATTTGACGCAGCTCGGGCACAAACGCATCGCGCAAATATCGGGGCCAGCAGA
GGCCACGCTGTGTAAGTTCCGCCATCAAGGTTATCAACAAGCTTTACGCCGCGCAGGAATTACCATGAACCCTAATTATT
GCACTTATGGTGATTTTACTTTTGAAGCTGGGGCTAAAGCACTGCGCCAATTATTGGCGTTATCTGAGCCACCCACAGCC
ATTTTTAGTCATAATGACAGTATGGCGATCGGTGTCATTAAGGAAGCCAAAAAATTGGGCTTGCGCGTTCCACAAGATAT
TTCAGTGGTGGGATTTGATGATATTCAATTTGCGCTCTACTGCGATCCACCGTTAACGACCATCTCACAGCCGCGCTATG
AGATAGGGCGTCAAGCGATGCTCATGATGCTCGATCTTCTTCGCGGTCAAGAGGTTGGCGCAGGTTCTCGACTATTAGAA
ACCAAGTTAGTGATTCGAGAAAGCGCAGCGCCTCCTCGCTTGAGCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	92.169	99.104	0.913
cytR	Vibrio parahaemolyticus RIMD 2210633	87.387	99.403	0.869