Detailed information NTG0730064

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NQS37_RS00820
• Genome accession: NZ_CP104498
• Coordinates: 165279..166412 (+)
• Length: 377 a.a.
• NCBI ID: WP_021155989.1
• Uniprot ID: -
• Organism: Ralstonia pseudosolanacearum strain Sw698
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 160279..171412

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQS37_RS00805 (NQS37_00805)	-	160903..162231 (-)	1329	WP_016725726.1	IS4 family transposase	-
NQS37_RS00810 (NQS37_00810)	-	162370..163713 (-)	1344	WP_011000351.1	M16 family metallopeptidase	-
NQS37_RS00815 (NQS37_00815)	-	163713..165218 (-)	1506	WP_011000350.1	M16 family metallopeptidase	-
NQS37_RS00820 (NQS37_00820)	pilA	165279..166412 (+)	1134	WP_021155989.1	signal recognition particle-docking protein FtsY	Machinery gene
NQS37_RS00825 (NQS37_00825)	-	166409..167047 (-)	639	WP_011000348.1	LysE/ArgO family amino acid transporter	-
NQS37_RS00830 (NQS37_00830)	maiA	167044..167694 (-)	651	WP_016724252.1	maleylacetoacetate isomerase	-
NQS37_RS00835 (NQS37_00835)	-	167698..168399 (-)	702	WP_011000346.1	fumarylacetoacetate hydrolase family protein	-
NQS37_RS00840 (NQS37_00840)	-	168547..169173 (+)	627	WP_038938076.1	ANTAR domain-containing response regulator	-
NQS37_RS00845 (NQS37_00845)	-	169450..170712 (+)	1263	WP_011000344.1	CmpA/NrtA family ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 40003.20 Da
• Isoelectric Point: 5.8101

>NTDB_id=730064 NQS37_RS00820 WP_021155989.1 165279..166412(+) (pilA) [Ralstonia pseudosolanacearum strain Sw698]
MFSFWKKRKAEPQPAAEPAPPAAAPEAAQAPAPAPVATPVPTPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVVEQAR
KGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAEGVKTALRDLLI
ELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQES
GDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFDDA
LGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Nucleotide

• Length: 1134 bp

>NTDB_id=730064 NQS37_RS00820 WP_021155989.1 165279..166412(+) (pilA) [Ralstonia pseudosolanacearum strain Sw698]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACCGGCGCCGCCCGCCGCCGCGCCCGAAGC
CGCACAGGCTCCTGCCCCGGCCCCGGTTGCCACCCCCGTCCCCACGCCGGCTCCCGCCCCGGTCGCCGTGCCGGATACGC
CGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGATGACATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAGGCGCGC
AAAGGCTGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGAGCCTGACCACGCTGTTCGTCGGCGTGAAGGT
GGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTCGATGCCACCGAGTACCTGCTGG
ACGAACTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGACCTGCTCATC
GAGCTGCTGCATCCGCTCGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGACGGTGATCATGATCGCGGGCGTCAACGG
TGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTATGGACAGTCCGTGCTGCTGGCCGCCGGCG
ACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAGGAATCG
GGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCGCGGCATCGACATCGTCATGGCCGACACCGC
CGGCCGCCTGCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAAGCGATGGCGACCG
CGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAAGCCTTCGACGATGCG
CTCGGCCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAAGGCGGCATCCTGGCCGCCATCGCGCGGCAGCG
GCCGGTGCCGGTGTATTTCATCGGCGTGGGCGAGCAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGCGAATTCGCCGACG
CGCTGCTGGGCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (177-377)

• SRP54-type protein, helical bundle domain (SRP54_N) (96-157)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.163	100	0.576