Detailed information NTG0730042

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NQS38_RS05520
• Genome accession: NZ_CP104496
• Coordinates: 1169572..1170705 (-)
• Length: 377 a.a.
• NCBI ID: WP_021155989.1
• Uniprot ID: -
• Organism: Ralstonia pseudosolanacearum strain Gj707
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1164572..1175705

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQS38_RS05495 (NQS38_05495)	-	1165272..1166534 (-)	1263	WP_011000344.1	CmpA/NrtA family ABC transporter substrate-binding protein	-
NQS38_RS05500 (NQS38_05500)	-	1166811..1167437 (-)	627	WP_038938076.1	ANTAR domain-containing response regulator	-
NQS38_RS05505 (NQS38_05505)	-	1167585..1168286 (+)	702	WP_011000346.1	fumarylacetoacetate hydrolase family protein	-
NQS38_RS05510 (NQS38_05510)	maiA	1168290..1168940 (+)	651	WP_016724252.1	maleylacetoacetate isomerase	-
NQS38_RS05515 (NQS38_05515)	-	1168937..1169575 (+)	639	WP_011000348.1	LysE/ArgO family amino acid transporter	-
NQS38_RS05520 (NQS38_05520)	pilA	1169572..1170705 (-)	1134	WP_021155989.1	signal recognition particle-docking protein FtsY	Machinery gene
NQS38_RS05525 (NQS38_05525)	-	1170766..1172271 (+)	1506	WP_011000350.1	M16 family metallopeptidase	-
NQS38_RS05530 (NQS38_05530)	-	1172271..1173614 (+)	1344	WP_011000351.1	M16 family metallopeptidase	-
NQS38_RS05535 (NQS38_05535)	rsmD	1173695..1174342 (+)	648	WP_016724254.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
NQS38_RS05540 (NQS38_05540)	coaD	1174538..1175044 (+)	507	WP_003262550.1	pantetheine-phosphate adenylyltransferase	-
NQS38_RS05545 (NQS38_05545)	-	1175095..1175343 (+)	249	WP_011000353.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 40003.20 Da
• Isoelectric Point: 5.8101

>NTDB_id=730042 NQS38_RS05520 WP_021155989.1 1169572..1170705(-) (pilA) [Ralstonia pseudosolanacearum strain Gj707]
MFSFWKKRKAEPQPAAEPAPPAAAPEAAQAPAPAPVATPVPTPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVVEQAR
KGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAEGVKTALRDLLI
ELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQES
GDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFDDA
LGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Nucleotide

• Length: 1134 bp

>NTDB_id=730042 NQS38_RS05520 WP_021155989.1 1169572..1170705(-) (pilA) [Ralstonia pseudosolanacearum strain Gj707]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACCGGCGCCGCCCGCCGCCGCGCCCGAAGC
CGCACAGGCTCCTGCCCCGGCCCCGGTTGCCACCCCCGTCCCCACGCCGGCTCCCGCCCCGGTCGCCGTGCCGGATACGC
CGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGATGACATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAGGCGCGC
AAAGGCTGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGAGCCTGACCACGCTGTTCGTCGGCGTGAAGGT
GGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTCGATGCCACCGAGTACCTGCTGG
ACGAACTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGACCTGCTCATC
GAGCTGCTGCATCCGCTCGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGACGGTGATCATGATCGCGGGCGTCAACGG
TGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTATGGACAGTCCGTGCTGCTGGCCGCCGGCG
ACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAGGAATCG
GGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCGCGGCATCGACATCGTCATGGCCGACACCGC
CGGCCGCCTGCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAAGCGATGGCGACCG
CGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAAGCCTTCGACGATGCG
CTCGGCCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAAGGCGGCATCCTGGCCGCCATCGCGCGGCAGCG
GCCGGTGCCGGTGTATTTCATCGGCGTGGGCGAGCAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGCGAATTCGCCGACG
CGCTGCTGGGCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (177-377)

• SRP54-type protein, helical bundle domain (SRP54_N) (96-157)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.163	100	0.576