Detailed information NTG0730020

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NQS35_RS02415
• Genome accession: NZ_CP104494
• Coordinates: 500984..502117 (-)
• Length: 377 a.a.
• NCBI ID: WP_021155989.1
• Uniprot ID: -
• Organism: Ralstonia pseudosolanacearum strain Cw717
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 495984..507117

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQS35_RS02390 (NQS35_02370)	-	496684..497946 (-)	1263	WP_011000344.1	CmpA/NrtA family ABC transporter substrate-binding protein	-
NQS35_RS02395 (NQS35_02375)	-	498223..498849 (-)	627	WP_038938076.1	ANTAR domain-containing response regulator	-
NQS35_RS02400 (NQS35_02380)	-	498997..499698 (+)	702	WP_011000346.1	fumarylacetoacetate hydrolase family protein	-
NQS35_RS02405 (NQS35_02385)	maiA	499702..500352 (+)	651	WP_016724252.1	maleylacetoacetate isomerase	-
NQS35_RS02410 (NQS35_02390)	-	500349..500987 (+)	639	WP_011000348.1	LysE/ArgO family amino acid transporter	-
NQS35_RS02415 (NQS35_02395)	pilA	500984..502117 (-)	1134	WP_021155989.1	signal recognition particle-docking protein FtsY	Machinery gene
NQS35_RS02420 (NQS35_02400)	-	502178..503683 (+)	1506	WP_011000350.1	M16 family metallopeptidase	-
NQS35_RS02425 (NQS35_02405)	-	503683..505026 (+)	1344	WP_011000351.1	M16 family metallopeptidase	-
NQS35_RS02430 (NQS35_02410)	-	505165..506493 (+)	1329	WP_016725726.1	IS4 family transposase	-

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 40003.20 Da
• Isoelectric Point: 5.8101

>NTDB_id=730020 NQS35_RS02415 WP_021155989.1 500984..502117(-) (pilA) [Ralstonia pseudosolanacearum strain Cw717]
MFSFWKKRKAEPQPAAEPAPPAAAPEAAQAPAPAPVATPVPTPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVVEQAR
KGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAEGVKTALRDLLI
ELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQES
GDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFDDA
LGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Nucleotide

• Length: 1134 bp

>NTDB_id=730020 NQS35_RS02415 WP_021155989.1 500984..502117(-) (pilA) [Ralstonia pseudosolanacearum strain Cw717]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACCGGCGCCGCCCGCCGCCGCGCCCGAAGC
CGCACAGGCTCCTGCCCCGGCCCCGGTTGCCACCCCCGTCCCCACGCCGGCTCCCGCCCCGGTCGCCGTGCCGGATACGC
CGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGATGACATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAGGCGCGC
AAAGGCTGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGAGCCTGACCACGCTGTTCGTCGGCGTGAAGGT
GGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTCGATGCCACCGAGTACCTGCTGG
ACGAACTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGACCTGCTCATC
GAGCTGCTGCATCCGCTCGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGACGGTGATCATGATCGCGGGCGTCAACGG
TGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTATGGACAGTCCGTGCTGCTGGCCGCCGGCG
ACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAGGAATCG
GGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCGCGGCATCGACATCGTCATGGCCGACACCGC
CGGCCGCCTGCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAAGCGATGGCGACCG
CGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAAGCCTTCGACGATGCG
CTCGGCCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAAGGCGGCATCCTGGCCGCCATCGCGCGGCAGCG
GCCGGTGCCGGTGTATTTCATCGGCGTGGGCGAGCAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGCGAATTCGCCGACG
CGCTGCTGGGCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (177-377)

• SRP54-type protein, helical bundle domain (SRP54_N) (96-157)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.163	100	0.576