Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   FOY93_RS07845 Genome accession   NZ_AP019634
Coordinates   1630725..1631351 (+) Length   208 a.a.
NCBI ID   WP_127730297.1    Uniprot ID   -
Organism   Enterobacter sp. 18A13     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1625725..1636351
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOY93_RS07825 (ECC18A13_015050) - 1626123..1627883 (-) 1761 WP_143344902.1 Lon protease family protein -
  FOY93_RS07830 (ECC18A13_015060) matP 1628070..1628522 (+) 453 WP_008499929.1 macrodomain Ter protein MatP -
  FOY93_RS07835 (ECC18A13_015070) ompA 1628588..1629643 (-) 1056 WP_023311028.1 porin OmpA -
  FOY93_RS07840 (ECC18A13_015080) sulA 1629998..1630507 (-) 510 WP_111964573.1 SOS-induced cell division inhibitor SulA -
  FOY93_RS07845 (ECC18A13_015090) sxy/tfoX 1630725..1631351 (+) 627 WP_127730297.1 TfoX/Sxy family DNA transformation protein Regulator
  FOY93_RS07850 (ECC18A13_015100) yccS 1631308..1633470 (-) 2163 WP_143344903.1 YccS family putative transporter -
  FOY93_RS07855 (ECC18A13_015110) - 1633490..1633936 (-) 447 WP_111964540.1 YccF domain-containing protein -
  FOY93_RS07860 (ECC18A13_015120) helD 1634060..1636114 (+) 2055 WP_143344904.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24072.67 Da        Isoelectric Point: 8.6320

>NTDB_id=72975 FOY93_RS07845 WP_127730297.1 1630725..1631351(+) (sxy/tfoX) [Enterobacter sp. 18A13]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEEMLRELGARACWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPADIRRELTEWFNALTEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=72975 FOY93_RS07845 WP_127730297.1 1630725..1631351(+) (sxy/tfoX) [Enterobacter sp. 18A13]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCTCAGGAATACCTCTCCCCGTTGGGCGAGATTCATCACCGCGCGTT
GTTTGGCGGCTATACCCTTGCGGTGGATGATGCTGTTTTTGCCATGGTCTCAGATGGCGAGCTTTACCTTCGCGCCTGTG
AGGAGAGTGCCAAATACTGTGTAAAAAATGCCTCCTCTTTTTTGACGTTGATGAAGCGAGGCCGTCCGGTGCTGCTCAAC
TATTATCGTGTTGATGACGGATTATGGCAGGACAGGGAGCGGTTACTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAGCGTTATCAGCGCCATCAACGAAACCGACTCAAGGATCTGCCAAACCTGACCTTTCAGCTTGAAGTCTTGCTCT
TTGAAGCTGGCATCACCAATGAGGAAATGTTGCGGGAGCTTGGTGCAAGGGCGTGCTGGCTAAAGATGCGGGCAAAAAAT
AAAGCGCTGAGTATTAAAGTTCTCTTCGCGCTGGAAGGGGCTATCGAGGGGCTGCATGAAGCGGCACTCCCGGCAGACAT
TCGCCGGGAGCTCACGGAGTGGTTTAATGCGTTGACTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

59.113

97.596

0.577

Multiple sequence alignment