Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   FOY96_RS14075 Genome accession   NZ_AP019632
Coordinates   2928869..2929495 (-) Length   208 a.a.
NCBI ID   WP_033145121.1    Uniprot ID   A0A263VSI0
Organism   Enterobacter asburiae strain 1808-013     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2923869..2934495
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOY96_RS14060 (EAS1808013_027190) helD 2924106..2926160 (-) 2055 WP_143347276.1 DNA helicase IV -
  FOY96_RS14065 (EAS1808013_027200) - 2926284..2926730 (+) 447 WP_023311032.1 YccF domain-containing protein -
  FOY96_RS14070 (EAS1808013_027210) yccS 2926750..2928912 (+) 2163 WP_143347277.1 YccS family putative transporter -
  FOY96_RS14075 (EAS1808013_027220) sxy/tfoX 2928869..2929495 (-) 627 WP_033145121.1 TfoX/Sxy family DNA transformation protein Regulator
  FOY96_RS14080 (EAS1808013_027230) sulA 2929713..2930222 (+) 510 WP_033145120.1 SOS-induced cell division inhibitor SulA -
  FOY96_RS14085 (EAS1808013_027240) ompA 2930577..2931632 (+) 1056 WP_023311028.1 porin OmpA -
  FOY96_RS14090 (EAS1808013_027250) matP 2931696..2932148 (-) 453 WP_032658161.1 macrodomain Ter protein MatP -
  FOY96_RS14095 (EAS1808013_027260) - 2932335..2934095 (+) 1761 WP_094934908.1 AAA family ATPase -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23876.44 Da        Isoelectric Point: 9.4588

>NTDB_id=72962 FOY96_RS14075 WP_033145121.1 2928869..2929495(-) (sxy/tfoX) [Enterobacter asburiae strain 1808-013]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALGIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=72962 FOY96_RS14075 WP_033145121.1 2928869..2929495(-) (sxy/tfoX) [Enterobacter asburiae strain 1808-013]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCCCCGTTGGGCGAGATTCATCATCGCGCACT
GTTTGGAGGCTATACCCTGGCGGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGAGAGCTTTATCTCCGCGCCTGTG
AGGAGAGTGCGAAATACTGTGTAAAAAATGCCTCCTCTTTTTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAACGGCTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAGCGCTATCAGCGCCATCAACGAAACCGACTCAAGGATCTGCCAAACCTGACCTTTCAGCTTGAAGTCTTGCTCT
TTGAAGCTGGCATTACCAATGAGGAAACGCTGCGGGCGCTGGGTGCCAGAGCGAGCTGGCTGAAGATGCGGGCAAAAAAC
AAAGCGCTCGGTATTAAGGTTCTCTTCGCACTGGAAGGGGCTATCGAGGGGCTGCATGAGGCGGCACTCCCGGCAGGCAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A263VSI0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567

Multiple sequence alignment