Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   N4Q31_RS14810 Genome accession   NZ_CP104391
Coordinates   2855730..2856371 (-) Length   213 a.a.
NCBI ID   WP_024423322.1    Uniprot ID   A0AAP7QNQ1
Organism   Bacillus safensis strain GX-H6     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2850730..2861371
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N4Q31_RS14775 (N4Q31_14775) - 2851855..2852286 (+) 432 WP_039181111.1 Na(+)/H(+) antiporter subunit B -
  N4Q31_RS14780 (N4Q31_14780) - 2852286..2852627 (+) 342 WP_024423316.1 Na(+)/H(+) antiporter subunit C -
  N4Q31_RS14785 (N4Q31_14785) - 2852620..2854098 (+) 1479 WP_024425940.1 Na+/H+ antiporter subunit D -
  N4Q31_RS14790 (N4Q31_14790) - 2854105..2854584 (+) 480 WP_024425941.1 Na+/H+ antiporter subunit E -
  N4Q31_RS14795 (N4Q31_14795) - 2854584..2854865 (+) 282 WP_039181117.1 Na(+)/H(+) antiporter subunit F1 -
  N4Q31_RS14800 (N4Q31_14800) mnhG 2854849..2855223 (+) 375 WP_260776105.1 monovalent cation/H(+) antiporter subunit G -
  N4Q31_RS14805 (N4Q31_14805) - 2855317..2855706 (-) 390 WP_260774694.1 hotdog fold thioesterase -
  N4Q31_RS14810 (N4Q31_14810) comA 2855730..2856371 (-) 642 WP_024423322.1 response regulator transcription factor Regulator
  N4Q31_RS14815 (N4Q31_14815) comP 2856452..2858764 (-) 2313 WP_260774696.1 ATP-binding protein Regulator
  N4Q31_RS14820 (N4Q31_14820) comX 2858819..2858989 (-) 171 WP_181286101.1 competence pheromone ComX -
  N4Q31_RS14825 (N4Q31_14825) - 2858986..2859900 (-) 915 WP_260774697.1 polyprenyl synthetase family protein -
  N4Q31_RS14830 (N4Q31_14830) degQ 2860052..2860192 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  N4Q31_RS14835 (N4Q31_14835) - 2860698..2861054 (+) 357 WP_052773115.1 hypothetical protein -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 24149.54 Da        Isoelectric Point: 4.6344

>NTDB_id=729447 N4Q31_RS14810 WP_024423322.1 2855730..2856371(-) (comA) [Bacillus safensis strain GX-H6]
MKKILVIDDHPAVMEGTKSILESDQQLSVDCLSPDAEAAFLKTHDFSIYDVILMDLNLGDINGMDIAKQILETNHQVKII
IYTGYEVDDYFEEAIRAGLHGAISKTETKDKIIEYIHRTLQGEVVIQLSYLKKLISQQQEKPEQAQQTDHDLLTERECLI
LREVEKGYTNQEIADVLHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSESVL

Nucleotide


Download         Length: 642 bp        

>NTDB_id=729447 N4Q31_RS14810 WP_024423322.1 2855730..2856371(-) (comA) [Bacillus safensis strain GX-H6]
ATGAAGAAGATATTGGTCATTGATGATCATCCGGCTGTCATGGAAGGGACAAAAAGCATATTAGAATCAGACCAGCAGCT
ATCAGTCGATTGTTTAAGTCCTGATGCAGAAGCCGCCTTTTTAAAGACGCATGACTTTTCCATCTATGATGTGATTTTAA
TGGATTTAAATCTCGGGGATATCAATGGAATGGACATTGCGAAACAAATTTTAGAAACCAACCATCAAGTGAAAATTATC
ATTTATACAGGGTATGAAGTAGATGATTATTTTGAAGAGGCTATTCGGGCTGGATTACACGGTGCAATCAGCAAAACAGA
GACGAAAGACAAAATTATTGAATACATACACCGGACATTGCAAGGGGAAGTTGTCATTCAGCTGTCCTATTTAAAGAAAT
TAATTTCACAGCAGCAAGAAAAACCAGAACAGGCGCAGCAGACTGATCACGATCTCTTAACCGAACGGGAGTGTTTGATC
CTTAGAGAAGTGGAAAAAGGATACACGAACCAGGAGATTGCCGATGTGCTTCATTTGAGCAAACGGTCAATTGAGTACAG
TTTGACATCCATCTTTAATAAGCTGAATGTTGGATCTCGTACAGAAGCGGTGTTAATTGCCAAGTCAGAAAGTGTGCTGT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(152-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

71.963

100

0.723