Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | N4Q31_RS06645 | Genome accession | NZ_CP104391 |
| Coordinates | 1315736..1317838 (-) | Length | 700 a.a. |
| NCBI ID | WP_260775878.1 | Uniprot ID | - |
| Organism | Bacillus safensis strain GX-H6 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1310736..1322838
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4Q31_RS06620 (N4Q31_06620) | - | 1311116..1311358 (+) | 243 | WP_039178071.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
| N4Q31_RS06625 (N4Q31_06625) | - | 1311405..1312910 (-) | 1506 | WP_058838975.1 | ATP-binding protein | - |
| N4Q31_RS06630 (N4Q31_06630) | - | 1313115..1313570 (+) | 456 | WP_034281539.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| N4Q31_RS06635 (N4Q31_06635) | motB | 1313799..1314569 (-) | 771 | WP_039178076.1 | flagellar motor protein MotB | - |
| N4Q31_RS06640 (N4Q31_06640) | motA | 1314562..1315356 (-) | 795 | WP_024424680.1 | flagellar motor stator protein MotA | - |
| N4Q31_RS06645 (N4Q31_06645) | clpC | 1315736..1317838 (-) | 2103 | WP_260775878.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| N4Q31_RS06650 (N4Q31_06650) | - | 1318083..1319126 (+) | 1044 | WP_260775879.1 | hypothetical protein | - |
| N4Q31_RS06655 (N4Q31_06655) | queC | 1319402..1320058 (+) | 657 | WP_059376926.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| N4Q31_RS06660 (N4Q31_06660) | queD | 1320059..1320499 (+) | 441 | WP_260775880.1 | 6-carboxytetrahydropterin synthase QueD | - |
| N4Q31_RS06665 (N4Q31_06665) | queE | 1320492..1321223 (+) | 732 | WP_047202223.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| N4Q31_RS06670 (N4Q31_06670) | queF | 1321239..1321736 (+) | 498 | WP_003211403.1 | preQ(1) synthase | - |
| N4Q31_RS06675 (N4Q31_06675) | - | 1322191..1322409 (+) | 219 | WP_039178087.1 | hypothetical protein | - |
| N4Q31_RS06680 (N4Q31_06680) | - | 1322533..1322721 (-) | 189 | WP_003211747.1 | DUF2187 family protein | - |
Sequence
Protein
Download Length: 700 a.a. Molecular weight: 77929.53 Da Isoelectric Point: 5.0317
>NTDB_id=729423 N4Q31_RS06645 WP_260775878.1 1315736..1317838(-) (clpC) [Bacillus safensis strain GX-H6]
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPQLFGGSSFFSQQAGHAPNMEQPKQKGLLDELGRN
LTDGANAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIASGDVPNKLKNKQIYLLDVSSLVA
NTGVRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAAL
ERRFQPVIVDEPTPDEAIDILKGIQDKYEAYHGVTYSDEAIKACVQLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDAAS
EDELTNRLAQIAAEKQAALKEEQYEKAAKLRDEEEAIEARLQNKTTDKEHIVTAEDIQAIVEQKTGIPVGKLQADEQTKM
KEIDVRLKARVIGQEHAVDKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSRDAIIRLDMSEYME
KHSVSKLIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN
AGSADKTVKVGFQSDQEEAIEEQSLIDSLSSYFKPEFLNRFDSIIQFDSLDREDLVKIVDLLLNELSEQLKEQNLTVHVT
NEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTEILLEEEQLSGFTVDVEHDEIVVKKG
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPQLFGGSSFFSQQAGHAPNMEQPKQKGLLDELGRN
LTDGANAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIASGDVPNKLKNKQIYLLDVSSLVA
NTGVRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAAL
ERRFQPVIVDEPTPDEAIDILKGIQDKYEAYHGVTYSDEAIKACVQLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDAAS
EDELTNRLAQIAAEKQAALKEEQYEKAAKLRDEEEAIEARLQNKTTDKEHIVTAEDIQAIVEQKTGIPVGKLQADEQTKM
KEIDVRLKARVIGQEHAVDKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSRDAIIRLDMSEYME
KHSVSKLIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN
AGSADKTVKVGFQSDQEEAIEEQSLIDSLSSYFKPEFLNRFDSIIQFDSLDREDLVKIVDLLLNELSEQLKEQNLTVHVT
NEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTEILLEEEQLSGFTVDVEHDEIVVKKG
Nucleotide
Download Length: 2103 bp
>NTDB_id=729423 N4Q31_RS06645 WP_260775878.1 1315736..1317838(-) (clpC) [Bacillus safensis strain GX-H6]
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACTATTCGCCTGAATATGCAAGTAAATTCGTCCCGAAGCCAAATGGT
TTTATGTGAAGACTGCTATACCTCTTTGATGGAGCAGTCAAAAATGAAAATGGGACCTCAGCTTTTTGGAGGAAGTTCAT
TCTTCTCTCAGCAGGCAGGTCATGCCCCAAACATGGAGCAGCCAAAACAAAAAGGCTTACTCGATGAGCTTGGCCGTAAC
TTAACAGATGGAGCAAATGCTGGCTTAATTGATCCAGTCATTGGCCGTGATGAAGAAGTCGCAAGAGTCATTGAGATTTT
AAATAGAAGAAATAAAAATAACCCTGTTCTTATTGGTGAACCAGGTGTTGGGAAAACAGCGATCGCAGAAGGACTCGCAC
TGAAAATTGCGAGCGGCGATGTACCAAATAAATTAAAGAACAAACAAATCTATTTATTAGATGTTTCTTCACTTGTCGCA
AACACAGGTGTACGCGGTCAATTTGAGGAAAGAATGAAGCAGTTAATTAAAGAACTGCAAAGCCGTAAAAATATCATCTT
GTTTGTAGATGAAATCCACCTTCTTGTGGGCGCAGGATCTGCAGAAGGATCAATGGATGCTGGAAACATTTTAAAACCAG
CCCTTGCAAGAGGCGAACTGCAGTTAGTAGGTGCGACGACATTAAAAGAATATCGCCAAATTGAAAAAGATGCTGCACTC
GAACGACGCTTCCAGCCCGTTATCGTGGATGAGCCAACACCAGATGAAGCGATCGACATCTTAAAAGGTATTCAAGATAA
GTACGAGGCCTATCATGGTGTCACCTATTCAGATGAAGCCATCAAAGCGTGCGTTCAATTATCTTCCCGGTATATTCAAG
ACCGACATTTGCCGGATAAAGCCATTGATCTAATGGATGAAGCTGGTTCAAAAGCGAACCTCTCCATTGATGCTGCAAGT
GAAGATGAACTGACAAACCGACTTGCGCAAATTGCCGCAGAAAAACAGGCTGCGCTAAAAGAAGAACAATATGAAAAAGC
AGCGAAGCTTCGCGATGAAGAAGAAGCCATTGAAGCAAGACTTCAAAACAAAACAACTGATAAAGAGCATATCGTCACAG
CAGAGGACATTCAGGCCATTGTGGAACAAAAAACAGGCATACCTGTCGGCAAACTGCAAGCAGACGAACAAACCAAAATG
AAAGAAATTGATGTCCGTCTAAAAGCACGAGTAATTGGACAGGAGCATGCGGTTGATAAAGTGGCGAAAGCCGTGAAAAG
AAGCAGAGCTGGATTAAAATCGAAACATAGACCGACAGGCTCCTTCCTTTTCGTTGGACCAACAGGTGTCGGGAAAACCG
AATTGTCTAAAACGCTGGCTGAAGAATTATTCGGTTCCAGAGATGCGATCATTCGTTTAGATATGAGTGAGTACATGGAA
AAACACTCTGTGTCCAAACTCATCGGTTCTCCTCCTGGTTATGTTGGACATGATGAAGCTGGCCAGCTGACTGAAAAAGT
GCGCAGAAAACCTTACAGCATCATTTTGCTGGATGAAATTGAAAAAGCACACCCAGATGTACAGCACATGTTCCTTCAAA
TCATGGAAGATGGCCGCTTAACAGACAGTCAAGGCAGAACGGTCAGCTTTAAAGATACAGTCATCATCATGACAAGTAAC
GCAGGCAGCGCAGATAAAACGGTCAAGGTCGGCTTCCAGTCTGATCAGGAAGAAGCAATTGAGGAACAATCACTCATTGA
TTCACTCAGCAGCTACTTCAAACCAGAATTTTTGAACCGCTTTGACAGCATTATTCAATTTGATTCACTAGACAGAGAGG
ACTTAGTGAAGATTGTTGATCTTCTGCTCAATGAGCTGTCAGAGCAATTAAAAGAACAGAATTTAACAGTCCATGTCACA
AATGAAGCGAAAGAAAAAATCGCAGAGCTTGGATATCACCCTGCATTTGGTGCTCGTCCACTTCGAAGAACCATCCAAGA
GCACGTTGAAGATCAAATGACAGAGATCCTGCTTGAAGAGGAGCAGCTTTCTGGATTTACTGTGGATGTTGAACATGACG
AAATCGTCGTAAAAAAAGGATAA
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACTATTCGCCTGAATATGCAAGTAAATTCGTCCCGAAGCCAAATGGT
TTTATGTGAAGACTGCTATACCTCTTTGATGGAGCAGTCAAAAATGAAAATGGGACCTCAGCTTTTTGGAGGAAGTTCAT
TCTTCTCTCAGCAGGCAGGTCATGCCCCAAACATGGAGCAGCCAAAACAAAAAGGCTTACTCGATGAGCTTGGCCGTAAC
TTAACAGATGGAGCAAATGCTGGCTTAATTGATCCAGTCATTGGCCGTGATGAAGAAGTCGCAAGAGTCATTGAGATTTT
AAATAGAAGAAATAAAAATAACCCTGTTCTTATTGGTGAACCAGGTGTTGGGAAAACAGCGATCGCAGAAGGACTCGCAC
TGAAAATTGCGAGCGGCGATGTACCAAATAAATTAAAGAACAAACAAATCTATTTATTAGATGTTTCTTCACTTGTCGCA
AACACAGGTGTACGCGGTCAATTTGAGGAAAGAATGAAGCAGTTAATTAAAGAACTGCAAAGCCGTAAAAATATCATCTT
GTTTGTAGATGAAATCCACCTTCTTGTGGGCGCAGGATCTGCAGAAGGATCAATGGATGCTGGAAACATTTTAAAACCAG
CCCTTGCAAGAGGCGAACTGCAGTTAGTAGGTGCGACGACATTAAAAGAATATCGCCAAATTGAAAAAGATGCTGCACTC
GAACGACGCTTCCAGCCCGTTATCGTGGATGAGCCAACACCAGATGAAGCGATCGACATCTTAAAAGGTATTCAAGATAA
GTACGAGGCCTATCATGGTGTCACCTATTCAGATGAAGCCATCAAAGCGTGCGTTCAATTATCTTCCCGGTATATTCAAG
ACCGACATTTGCCGGATAAAGCCATTGATCTAATGGATGAAGCTGGTTCAAAAGCGAACCTCTCCATTGATGCTGCAAGT
GAAGATGAACTGACAAACCGACTTGCGCAAATTGCCGCAGAAAAACAGGCTGCGCTAAAAGAAGAACAATATGAAAAAGC
AGCGAAGCTTCGCGATGAAGAAGAAGCCATTGAAGCAAGACTTCAAAACAAAACAACTGATAAAGAGCATATCGTCACAG
CAGAGGACATTCAGGCCATTGTGGAACAAAAAACAGGCATACCTGTCGGCAAACTGCAAGCAGACGAACAAACCAAAATG
AAAGAAATTGATGTCCGTCTAAAAGCACGAGTAATTGGACAGGAGCATGCGGTTGATAAAGTGGCGAAAGCCGTGAAAAG
AAGCAGAGCTGGATTAAAATCGAAACATAGACCGACAGGCTCCTTCCTTTTCGTTGGACCAACAGGTGTCGGGAAAACCG
AATTGTCTAAAACGCTGGCTGAAGAATTATTCGGTTCCAGAGATGCGATCATTCGTTTAGATATGAGTGAGTACATGGAA
AAACACTCTGTGTCCAAACTCATCGGTTCTCCTCCTGGTTATGTTGGACATGATGAAGCTGGCCAGCTGACTGAAAAAGT
GCGCAGAAAACCTTACAGCATCATTTTGCTGGATGAAATTGAAAAAGCACACCCAGATGTACAGCACATGTTCCTTCAAA
TCATGGAAGATGGCCGCTTAACAGACAGTCAAGGCAGAACGGTCAGCTTTAAAGATACAGTCATCATCATGACAAGTAAC
GCAGGCAGCGCAGATAAAACGGTCAAGGTCGGCTTCCAGTCTGATCAGGAAGAAGCAATTGAGGAACAATCACTCATTGA
TTCACTCAGCAGCTACTTCAAACCAGAATTTTTGAACCGCTTTGACAGCATTATTCAATTTGATTCACTAGACAGAGAGG
ACTTAGTGAAGATTGTTGATCTTCTGCTCAATGAGCTGTCAGAGCAATTAAAAGAACAGAATTTAACAGTCCATGTCACA
AATGAAGCGAAAGAAAAAATCGCAGAGCTTGGATATCACCCTGCATTTGGTGCTCGTCCACTTCGAAGAACCATCCAAGA
GCACGTTGAAGATCAAATGACAGAGATCCTGCTTGAAGAGGAGCAGCTTTCTGGATTTACTGTGGATGTTGAACATGACG
AAATCGTCGTAAAAAAAGGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. cremoris KW2 |
56.775 |
100 |
0.599 |
| clpE | Streptococcus mutans UA159 |
56.334 |
100 |
0.597 |
| clpE | Streptococcus pneumoniae Rx1 |
55.525 |
100 |
0.574 |
| clpE | Streptococcus pneumoniae D39 |
55.525 |
100 |
0.574 |
| clpE | Streptococcus pneumoniae R6 |
55.525 |
100 |
0.574 |
| clpE | Streptococcus pneumoniae TIGR4 |
55.525 |
100 |
0.574 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
53.881 |
95.714 |
0.516 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.231 |
92.857 |
0.439 |
| clpC | Streptococcus thermophilus LMD-9 |
46.13 |
92.286 |
0.426 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.975 |
92.286 |
0.424 |
| clpC | Streptococcus mutans UA159 |
44.172 |
93.143 |
0.411 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.154 |
92.857 |
0.41 |
| clpC | Streptococcus pneumoniae Rx1 |
44.341 |
92.143 |
0.409 |
| clpC | Streptococcus pneumoniae D39 |
44.341 |
92.143 |
0.409 |