Detailed information NTG0729416

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: N4Q31_RS05610
• Genome accession: NZ_CP104391
• Coordinates: 1130001..1130963 (+)
• Length: 320 a.a.
• NCBI ID: WP_058838840.1
• Uniprot ID: -
• Organism: Bacillus safensis strain GX-H6
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1125001..1135963

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N4Q31_RS05580 (N4Q31_05580)	argF	1125326..1126276 (+)	951	WP_039177780.1	ornithine carbamoyltransferase	-
N4Q31_RS05585 (N4Q31_05585)	-	1126379..1126558 (+)	180	WP_008348517.1	YjzC family protein	-
N4Q31_RS05590 (N4Q31_05590)	-	1126722..1127987 (+)	1266	WP_024426491.1	MFS transporter	-
N4Q31_RS05595 (N4Q31_05595)	-	1128113..1128307 (-)	195	WP_003211779.1	YjzD family protein	-
N4Q31_RS05600 (N4Q31_05600)	-	1128520..1129260 (+)	741	WP_047201782.1	hypothetical protein	-
N4Q31_RS05605 (N4Q31_05605)	-	1129334..1129909 (+)	576	WP_260775800.1	nad binding enzyme	-
N4Q31_RS05610 (N4Q31_05610)	med	1130001..1130963 (+)	963	WP_058838840.1	BMP family ABC transporter substrate-binding protein	Regulator
N4Q31_RS05615 (N4Q31_05615)	comZ	1130977..1131174 (+)	198	WP_024425054.1	ComZ family protein	Regulator
N4Q31_RS05620 (N4Q31_05620)	-	1131185..1131418 (-)	234	WP_039177793.1	hypothetical protein	-
N4Q31_RS05625 (N4Q31_05625)	-	1131590..1132528 (+)	939	WP_024425052.1	beta-ketoacyl-ACP synthase III	-
N4Q31_RS05630 (N4Q31_05630)	fabF	1132550..1133791 (+)	1242	WP_039177794.1	beta-ketoacyl-ACP synthase II	-
N4Q31_RS05635 (N4Q31_05635)	-	1133869..1134672 (+)	804	WP_144464927.1	DUF2268 domain-containing protein	-
N4Q31_RS05640 (N4Q31_05640)	-	1134822..1135802 (+)	981	WP_260775818.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 35667.53 Da
• Isoelectric Point: 5.0003

>NTDB_id=729416 N4Q31_RS05610 WP_058838840.1 1130001..1130963(+) (med) [Bacillus safensis strain GX-H6]
MKYQRLVMIFSFLLLLSACSQAPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLSIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPNIQFITVNGNKPQADNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQGEYSFDFKEGVIEMGKFSTTIDDAFVKDIESDIASYKKTGKLPNEK

Nucleotide

• Length: 963 bp

>NTDB_id=729416 N4Q31_RS05610 WP_058838840.1 1130001..1130963(+) (med) [Bacillus safensis strain GX-H6]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTATTATCTGCCTGCTCGCAGGCGCCTTTAAAAGGAAA
AATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATCAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
GTATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAGGAGAAAATCGTTGATGCCATTGAA
GAATTCCATAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGTGAAATTTTCAACTTGATCAGTGAAGA
TTATCCAAACATACAATTTATTACGGTCAATGGAAACAAGCCTCAGGCGGACAATGTCACAAACGTGACATTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCTGCACATATGTCTAAAACAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGTGAGGTAGACGGCTTTATCAAAGGGGCAAAATATCAAGATGAACATGTACAAGTGTTAGCAGAGTTTGTCGA
AAACTGGGATGATGCTGACAAAGCGGTGGAGCTCTATCAAAAATTAAAAAAGCAGGGCGTAGATGTTGTGTATCCCGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGGTACGTGACTGATCAATCC
AACCTCGGAAGTCATACGGTTTTAACGAGCACTGTCCAGCATGTTGATAAAGCGTACAGCATCATTGCAAAGAAATTTAA
TGAAGGCAAGCTGAATGAACAAGGTGAGTACTCCTTTGATTTTAAAGAAGGAGTGATCGAGATGGGGAAATTTAGCACCA
CCATTGACGACGCTTTTGTGAAAGACATTGAAAGTGATATTGCGTCTTACAAAAAAACAGGCAAACTGCCAAATGAAAAG
TGA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (28-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	64.537	97.813	0.631