Detailed information NTG0729245

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: N5B55_RS01385
• Genome accession: NZ_CP104381
• Coordinates: 296966..298174 (-)
• Length: 402 a.a.
• NCBI ID: WP_304538909.1
• Uniprot ID: -
• Organism: Ralstonia pickettii strain MCR
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 291966..303174

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N5B55_RS01360 (N5B55_01360)	-	292321..292851 (-)	531	WP_304538906.1	hypothetical protein	-
N5B55_RS01365 (N5B55_01365)	-	294558..295022 (-)	465	WP_258035441.1	hypothetical protein	-
N5B55_RS01370 (N5B55_01370)	-	295097..295720 (-)	624	WP_304538907.1	hypothetical protein	-
N5B55_RS01375 (N5B55_01375)	-	295717..296328 (-)	612	WP_012761080.1	PAAR domain-containing protein	-
N5B55_RS01380 (N5B55_01380)	-	296340..296702 (-)	363	WP_304538908.1	PAAR domain-containing protein	-
N5B55_RS01385 (N5B55_01385)	pilA	296966..298174 (-)	1209	WP_304538909.1	signal recognition particle-docking protein FtsY	Machinery gene
N5B55_RS01390 (N5B55_01390)	-	298235..299731 (+)	1497	WP_178959244.1	pitrilysin family protein	-
N5B55_RS01395 (N5B55_01395)	-	299731..301083 (+)	1353	WP_304538910.1	pitrilysin family protein	-
N5B55_RS01400 (N5B55_01400)	rsmD	301178..301834 (+)	657	WP_304538911.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
N5B55_RS01405 (N5B55_01405)	coaD	302032..302535 (+)	504	WP_004633426.1	pantetheine-phosphate adenylyltransferase	-
N5B55_RS01410 (N5B55_01410)	-	302586..302849 (+)	264	WP_004633424.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 402 a.a.
• Molecular weight: 42116.73 Da
• Isoelectric Point: 6.6601

>NTDB_id=729245 N5B55_RS01385 WP_304538909.1 296966..298174(-) (pilA) [Ralstonia pickettii strain MCR]
MFSFWKKRKAEPQPAAEPTPAAALEAAQAPAPAAIPGAIPGATPAPIPAPVAAPQPVSAPAPAPAPVAAPAHVAVPDAPA
AQPALDVQAGDVETVPTPAVIEQARKGWMSRLRSGLSKTSKGLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLAE
LRRRIKAQRIETSEGVKTALRDLLVELLHPLEKTMVLGREQPMVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDT
FRAAAREQLVIWGQRNNVTVVAQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVTAKAMATAP
HETLLVIDGNTGQNALAQVKAFDEALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADAL
LG

Nucleotide

• Length: 1209 bp

>NTDB_id=729245 N5B55_RS01385 WP_304538909.1 296966..298174(-) (pilA) [Ralstonia pickettii strain MCR]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAACCGGCCGCCGAACCCACGCCCGCAGCGGCACTCGAAGCCGC
GCAGGCGCCTGCCCCGGCTGCCATCCCCGGCGCCATCCCCGGCGCCACCCCCGCCCCCATACCCGCACCGGTTGCAGCCC
CCCAGCCCGTCTCTGCGCCGGCTCCCGCGCCCGCACCTGTCGCGGCGCCGGCCCACGTTGCCGTGCCGGACGCACCTGCT
GCGCAGCCTGCGCTCGACGTGCAAGCCGGAGACGTCGAAACCGTCCCCACGCCCGCCGTGATCGAACAGGCCCGCAAGGG
CTGGATGTCACGCCTGCGCTCCGGCCTGTCGAAGACGAGCAAGGGCCTGACCACACTCTTCGTCGGCGTCAAGGTGGACG
AAGCGCTGTTCGAAGAGCTGGAGACCGCCCTGCTGATGGCCGACGCGGGTGTCGACGCCACCGAATACCTGCTGGCCGAA
CTGCGCCGCCGCATCAAGGCCCAGCGCATCGAAACCTCGGAGGGCGTGAAAACTGCCCTGCGCGACCTGCTCGTCGAGCT
GCTGCACCCCCTGGAAAAAACCATGGTGCTCGGCCGCGAACAGCCGATGGTGATCATGATCGCGGGCGTGAACGGCGCCG
GCAAGACGACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACGTACGGTCAATCGGTGCTGCTGGCCGCGGGTGACACG
TTCCGTGCCGCCGCGCGCGAGCAACTCGTGATCTGGGGTCAGCGCAACAACGTCACGGTCGTGGCGCAGGAATCGGGCGA
CCCCGCCGCCGTGATCTTCGATGCAGTGAATGCCGCTCGCGCACGCGGCATCGACATCGTCATGGCCGACACCGCCGGCC
GCCTGCCGACGCAGCTGCACCTGATGGAAGAGCTGAAGAAAGTGCGCCGCGTGACCGCCAAGGCGATGGCCACGGCGCCG
CACGAAACGCTGCTGGTGATCGACGGCAACACGGGGCAGAACGCCCTTGCGCAAGTCAAAGCCTTTGATGAAGCGCTTGG
CCTCACGGGCCTGATCGTCACCAAGCTGGACGGCACGGCCAAGGGCGGCATCCTGGCCGCGATTGCGCGGCAGCGGCCGG
TGCCGGTCTACTTCATCGGCGTGGGCGAGCAAGTGGAGGATCTGCAGCCGTTTTCGGCGCGGGAATTTGCGGATGCGTTG
TTGGGATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (121-182)

• SRP54-type protein, GTPase domain (SRP54) (202-402)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.667	100	0.54