Detailed information NTG0729233

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: N4T19_RS21360
• Genome accession: NZ_CP104377
• Coordinates: 4698820..4700034 (-)
• Length: 404 a.a.
• NCBI ID: WP_182345106.1
• Uniprot ID: -
• Organism: Comamonas sp. PR12
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4693820..4705034

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N4T19_RS21345 (N4T19_21345)	cutA	4694179..4694541 (+)	363	WP_232539545.1	divalent-cation tolerance protein CutA	-
N4T19_RS21350 (N4T19_21350)	-	4694568..4695347 (-)	780	WP_260718967.1	DeoR/GlpR family DNA-binding transcription regulator	-
N4T19_RS21355 (N4T19_21355)	-	4695495..4698665 (-)	3171	WP_260718968.1	metallophosphoesterase family protein	-
N4T19_RS21360 (N4T19_21360)	pilA	4698820..4700034 (-)	1215	WP_182345106.1	signal recognition particle-docking protein FtsY	Machinery gene
N4T19_RS21365 (N4T19_21365)	-	4700063..4701508 (+)	1446	WP_260718969.1	M16 family metallopeptidase	-
N4T19_RS21370 (N4T19_21370)	-	4701610..4702953 (+)	1344	WP_260718970.1	M16 family metallopeptidase	-
N4T19_RS21375 (N4T19_21375)	rsmD	4702953..4703666 (+)	714	WP_182345109.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
N4T19_RS21380 (N4T19_21380)	coaD	4703771..4704268 (+)	498	WP_043339436.1	pantetheine-phosphate adenylyltransferase	-

Sequence

Protein

• Length: 404 a.a.
• Molecular weight: 41928.15 Da
• Isoelectric Point: 7.0000

>NTDB_id=729233 N4T19_RS21360 WP_182345106.1 4698820..4700034(-) (pilA) [Comamonas sp. PR12]
MFSFFKKKSPAADAAPSPSAAEPAPAPAPAADVPPPAPQVPSAPLTPIRPVAAEPTKTGWLRGLGMGGKAAAPAPTAAET
VTKNPVTQAPQAPVAPITIASEPASSRDSWMNRLKSGLRKTGSSIATVFTGTKIDEQLYEELEEALLMADTGVKATQHLL
KDLKQRVKDSKTTDPAAVKDLLASALADLLAPLEKPLVIGEHSPTVIMVAGVNGAGKTTSIGKLTKHLADAGQSVLLAAA
DTFRAAAREQLGVWATRNTVEIISQEGGDPAAVSFDAVTAGKARGKDVVLVDTAGRLPTQLHLMEELKKIKRVVTKADGS
APHEVLLVIDGNTGQNALNQVRAFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKVEDLETFSAKEFAQ
ALLA

Nucleotide

• Length: 1215 bp

>NTDB_id=729233 N4T19_RS21360 WP_182345106.1 4698820..4700034(-) (pilA) [Comamonas sp. PR12]
ATGTTCAGTTTTTTCAAGAAAAAATCTCCCGCTGCCGACGCAGCCCCCAGCCCTTCCGCCGCCGAGCCAGCGCCTGCGCC
CGCTCCAGCGGCCGATGTCCCGCCGCCCGCACCCCAGGTGCCCAGCGCGCCGCTGACCCCGATCCGCCCTGTGGCTGCCG
AGCCCACCAAGACGGGCTGGCTGCGTGGCCTGGGCATGGGCGGCAAGGCCGCAGCCCCGGCACCCACGGCTGCAGAAACG
GTCACGAAAAACCCAGTTACACAAGCTCCGCAGGCTCCGGTAGCTCCTATCACTATAGCATCCGAGCCCGCCAGCAGCCG
CGACAGCTGGATGAACCGCTTGAAGAGCGGTTTGCGCAAAACCGGCTCGAGCATTGCCACGGTCTTCACCGGCACCAAGA
TCGACGAGCAGCTCTACGAAGAGCTCGAAGAGGCGCTGCTGATGGCCGATACCGGCGTCAAGGCAACCCAGCATCTGCTC
AAAGACCTCAAGCAGCGCGTCAAGGACAGCAAGACCACCGACCCCGCCGCTGTCAAGGACCTGCTGGCCAGCGCGCTGGC
AGATCTGCTCGCGCCACTGGAAAAGCCACTGGTCATTGGCGAGCACAGCCCCACGGTCATCATGGTGGCTGGCGTCAACG
GCGCTGGCAAGACCACCTCGATCGGCAAGCTGACCAAGCACCTGGCCGATGCCGGCCAGAGCGTGCTGCTGGCAGCGGCC
GACACCTTCCGCGCTGCGGCGCGTGAGCAGCTGGGCGTCTGGGCCACCCGCAACACCGTCGAGATCATCAGCCAGGAAGG
CGGCGACCCCGCGGCCGTCAGCTTTGATGCGGTGACCGCCGGCAAGGCCCGGGGCAAGGATGTCGTGCTGGTGGATACCG
CCGGGCGCCTGCCCACGCAGCTGCACCTGATGGAAGAGCTCAAGAAGATCAAACGCGTCGTCACCAAGGCCGATGGCAGC
GCGCCGCACGAGGTGCTGCTGGTCATTGATGGCAACACCGGCCAGAACGCGCTCAACCAGGTGCGCGCCTTTGACGATGC
ACTGCAGCTGACCGGCCTGATCGTCACCAAGCTCGACGGCACGGCCAAGGGCGGCGTGCTGGCCGCCATCGCGCAGGAGC
GCCCCATCCCTGTGTACTTCATCGGTGTGGGTGAAAAGGTCGAAGACCTCGAGACCTTCAGCGCCAAGGAATTTGCCCAG
GCGCTGCTCGCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (123-186)

• SRP54-type protein, GTPase domain (SRP54) (204-403)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50.238	100	0.522