Detailed information NTG0728934

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: N4T37_RS19440
• Genome accession: NZ_CP104350
• Coordinates: 3532046..3532747 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594590.1
• Uniprot ID: A0A427R546
• Organism: Acinetobacter baumannii strain 2021CK-01333
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3527046..3537747

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N4T37_RS19410 (N4T37_19405)	-	3527352..3527795 (-)	444	WP_001246674.1	SRPBCC family protein	-
N4T37_RS19415 (N4T37_19410)	tadA	3527865..3528368 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
N4T37_RS19420 (N4T37_19415)	-	3528375..3529499 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
N4T37_RS19425 (N4T37_19420)	ung	3529496..3530209 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
N4T37_RS19430 (N4T37_19425)	-	3530260..3530856 (-)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
N4T37_RS19435 (N4T37_19430)	gspK	3531087..3532046 (-)	960	WP_000301471.1	type II secretion system minor pseudopilin GspK	-
N4T37_RS19440 (N4T37_19435)	xcpW	3532046..3532747 (-)	702	WP_000594590.1	type II secretion system minor pseudopilin GspJ	Machinery gene
N4T37_RS19445 (N4T37_19440)	xcpV	3532747..3533127 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
N4T37_RS19450 (N4T37_19445)	-	3533117..3533671 (-)	555	WP_000841373.1	type II secretion system protein	-
N4T37_RS19455 (N4T37_19450)	-	3533681..3534289 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
N4T37_RS19460 (N4T37_19455)	-	3534327..3535100 (-)	774	WP_000497301.1	TatD family hydrolase	-
N4T37_RS19465 (N4T37_19460)	-	3535118..3535459 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
N4T37_RS19470 (N4T37_19465)	-	3535471..3536451 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
N4T37_RS19475 (N4T37_19470)	kdsB	3536463..3537224 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26627.52 Da
• Isoelectric Point: 9.3468

>NTDB_id=728934 N4T37_RS19440 WP_000594590.1 3532046..3532747(-) (xcpW) [Acinetobacter baumannii strain 2021CK-01333]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWTYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=728934 N4T37_RS19440 WP_000594590.1 3532046..3532747(-) (xcpW) [Acinetobacter baumannii strain 2021CK-01333]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGACTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A427R546

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991