Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   P3U40_RS08535 Genome accession   NZ_CP120025
Coordinates   1763848..1765122 (+) Length   424 a.a.
NCBI ID   WP_001279346.1    Uniprot ID   -
Organism   Staphylococcus aureus strain Dog145     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1758848..1770122
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3U40_RS08515 (P3U40_08515) - 1760172..1760267 (+) 96 WP_031775019.1 hypothetical protein -
  P3U40_RS08520 (P3U40_08520) - 1760228..1761358 (-) 1131 WP_000721708.1 HAD family hydrolase -
  P3U40_RS08525 (P3U40_08525) nagE 1761465..1762931 (-) 1467 WP_000276363.1 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  P3U40_RS08530 (P3U40_08530) - 1763059..1763676 (-) 618 WP_000287588.1 lysophospholipid acyltransferase family protein -
  P3U40_RS08535 (P3U40_08535) htrA 1763848..1765122 (+) 1275 WP_001279346.1 S1C family serine protease Regulator
  P3U40_RS08540 (P3U40_08540) tyrS 1765216..1766478 (-) 1263 WP_000186042.1 tyrosine--tRNA ligase -
  P3U40_RS08545 (P3U40_08545) - 1766859..1767764 (+) 906 WP_000184370.1 transglycosylase domain-containing protein -
  P3U40_RS08550 (P3U40_08550) - 1767744..1767836 (-) 93 WP_244758723.1 hypothetical protein -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 45802.00 Da        Isoelectric Point: 10.0363

>NTDB_id=728934 P3U40_RS08535 WP_001279346.1 1763848..1765122(+) (htrA) [Staphylococcus aureus strain Dog145]
MSDFNHTNHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSK
KFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDREDGIYVAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQ
KEQPKRQSRSERQSPGQGDRDFFR

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=728934 P3U40_RS08535 WP_001279346.1 1763848..1765122(+) (htrA) [Staphylococcus aureus strain Dog145]
ATGTCAGATTTTAATCATACAAATCATTCTACAACAAACCATAGCCAAACACCTAGATACAGAAGACCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTGCTGGAATTATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTTCAGACAACAAATAATAAAGGTGGCAATCAATTAGACGGTCAAAGCAAG
AAATTCGGTACCGTTCATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTTATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCTGGAGTAGGTTCAGGTGTTATCTATCAAATAAACA
ACAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATGGCGCAAATGAAATTAGAGTCCAATTACATAATAAAAAA
CAAGTTAAAGCGAAATTAGTTGGTAAAGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACAAAAGGTATTAA
AGCGATTCAATTTGCCAACTCTTCAAAAGTACAAACTGGCGATAGCGTATTCGCAATGGGTAACCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGCGAACGTACGATTGACGCTGAGACAACTGGTGGCAATACAAAA
GTTAGCGTTCTTCAAACAGATGCTGCTATTAACCCAGGTAACTCAGGTGGCGCATTAGTAGATATTAATGGTAATTTAGT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATCGGGTTTGCTATTCCAAGTAATGAAGTTAAAGTAA
CAATTGAACAACTTGTAAAACATGGTAAAATTGACCGCCCTTCGATTGGTATTGGTTTAATTAATTTGAAAGATATTCCT
GAAGAAGAGCGCGAGCAACTTCATACTGATAGAGAAGACGGTATTTATGTCGCCAAAGCTGATAGTGATATTGATCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAACCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACAAAAGAAGTTAAAGTGAAATTAAAACAACAA
AAAGAACAACCAAAACGTCAAAGCCGATCAGAACGTCAATCACCTGGCCAAGGCGATAGAGATTTCTTTAGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

38.806

94.811

0.368