Detailed information NTG0728864

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: N4T36_RS09460
• Genome accession: NZ_CP104347
• Coordinates: 1452896..1453597 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594590.1
• Uniprot ID: A0A427R546
• Organism: Acinetobacter baumannii strain 2021CK-01332
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1447896..1458597

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N4T36_RS09425 (N4T36_09425)	kdsB	1448419..1449180 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
N4T36_RS09430 (N4T36_09430)	-	1449192..1450172 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
N4T36_RS09435 (N4T36_09435)	-	1450184..1450525 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
N4T36_RS09440 (N4T36_09440)	-	1450543..1451316 (+)	774	WP_000497301.1	TatD family hydrolase	-
N4T36_RS09445 (N4T36_09445)	-	1451354..1451962 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
N4T36_RS09450 (N4T36_09450)	-	1451972..1452526 (+)	555	WP_000841373.1	type II secretion system protein	-
N4T36_RS09455 (N4T36_09455)	xcpV	1452516..1452896 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
N4T36_RS09460 (N4T36_09460)	xcpW	1452896..1453597 (+)	702	WP_000594590.1	type II secretion system minor pseudopilin GspJ	Machinery gene
N4T36_RS09465 (N4T36_09465)	gspK	1453597..1454556 (+)	960	WP_000301471.1	type II secretion system minor pseudopilin GspK	-
N4T36_RS09470 (N4T36_09470)	-	1454787..1455383 (+)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
N4T36_RS09475 (N4T36_09475)	ung	1455434..1456147 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
N4T36_RS09480 (N4T36_09480)	-	1456144..1457268 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
N4T36_RS09485 (N4T36_09485)	tadA	1457275..1457777 (+)	503	Protein_1455	tRNA adenosine(34) deaminase TadA	-
N4T36_RS09490 (N4T36_09490)	-	1457847..1458290 (+)	444	WP_001246674.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26627.52 Da
• Isoelectric Point: 9.3468

>NTDB_id=728864 N4T36_RS09460 WP_000594590.1 1452896..1453597(+) (xcpW) [Acinetobacter baumannii strain 2021CK-01332]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWTYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=728864 N4T36_RS09460 WP_000594590.1 1452896..1453597(+) (xcpW) [Acinetobacter baumannii strain 2021CK-01332]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGACTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A427R546

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991