Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   P3U71_RS03170 Genome accession   NZ_CP120020
Coordinates   665708..666382 (+) Length   224 a.a.
NCBI ID   WP_001166500.1    Uniprot ID   Q99VW2
Organism   Staphylococcus aureus strain Dog148     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 660708..671382
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3U71_RS03145 (P3U71_03145) - 660923..661990 (+) 1068 WP_000980137.1 membrane protein -
  P3U71_RS03150 (P3U71_03150) - 662141..663184 (+) 1044 WP_001030770.1 alpha/beta hydrolase -
  P3U71_RS03155 (P3U71_03155) - 663513..663941 (+) 429 WP_000198504.1 hypothetical protein -
  P3U71_RS03160 (P3U71_03160) - 664150..664656 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  P3U71_RS03165 (P3U71_03165) graX 664769..665692 (+) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  P3U71_RS03170 (P3U71_03170) braR 665708..666382 (+) 675 WP_001166500.1 response regulator transcription factor GraR/ApsR Regulator
  P3U71_RS03175 (P3U71_03175) graS 666375..667415 (+) 1041 WP_001061262.1 histidine kinase GraS/ApsS -
  P3U71_RS03180 (P3U71_03180) vraF 667559..668320 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  P3U71_RS03185 (P3U71_03185) vraG 668310..670199 (+) 1890 WP_000143623.1 ABC transporter permease VraG -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26065.87 Da        Isoelectric Point: 4.3563

>NTDB_id=728697 P3U71_RS03170 WP_001166500.1 665708..666382(+) (braR) [Staphylococcus aureus strain Dog148]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=728697 P3U71_RS03170 WP_001166500.1 665708..666382(+) (braR) [Staphylococcus aureus strain Dog148]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTGTCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q99VW2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397