Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   N3Z98_RS05775 Genome accession   NZ_CP104325
Coordinates   1137725..1138909 (-) Length   394 a.a.
NCBI ID   WP_066776893.1    Uniprot ID   A0A6A7JST6
Organism   Campylobacter hepaticus strain RBCL71delta     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1132725..1143909
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N3Z98_RS05750 (N3Z98_05750) fliL 1133893..1134426 (+) 534 WP_066776907.1 flagellar basal body-associated protein FliL -
  N3Z98_RS05755 (N3Z98_05755) acpS 1134426..1134773 (+) 348 WP_066776904.1 holo-ACP synthase -
  N3Z98_RS05760 (N3Z98_05760) - 1134775..1135176 (-) 402 WP_066776902.1 hypothetical protein -
  N3Z98_RS05765 (N3Z98_05765) - 1135173..1136543 (-) 1371 WP_066776899.1 cytochrome P450 -
  N3Z98_RS05770 (N3Z98_05770) - 1136540..1137658 (-) 1119 WP_152778931.1 DUF829 domain-containing protein -
  N3Z98_RS05775 (N3Z98_05775) kpsS 1137725..1138909 (-) 1185 WP_066776893.1 capsule biosynthesis protein Regulator
  N3Z98_RS05780 (N3Z98_05780) - 1138906..1140975 (-) 2070 WP_196913881.1 capsular polysaccharide biosynthesis protein -
  N3Z98_RS05785 (N3Z98_05785) - 1140985..1142037 (-) 1053 WP_083074275.1 phosphonoacetaldehyde reductase -
  N3Z98_RS05790 (N3Z98_05790) aepY 1142030..1143226 (-) 1197 WP_066776884.1 phosphonopyruvate decarboxylase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 47008.92 Da        Isoelectric Point: 10.0512

>NTDB_id=728629 N3Z98_RS05775 WP_066776893.1 1137725..1138909(-) (kpsS) [Campylobacter hepaticus strain RBCL71delta]
MRFSDKIKKEFSDKNVLLLQGPVGNFFHKLAIKMQKNKTKVFKLNFNGGDFFFYPSGIRCKCHEVELENFYENFLKTKKI
DAIIMYNDCRIIHAKAIKIAKRLNLAIWIFEEGYLRPYCITLEQNGVNANSFLPKDKNFYLYQNICTKDSIKEIPGSFKF
IAFDAFLYWLFAFLLAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNKKIYNLDKKYFLAILQVYNDTQIKYH
YKKSIEYFIEEIILSFANHARAKSYLVFKHHPMDRGYKNYTRLIQNLSQKYHVEGRVLYVHDTHLPTLLKKALGCITINS
TVGFSAILEGCPTKVCGNAFYDFEGLTYPRKLQFFWREAHAYKPNPILTINFKAYLLQTNQFNGNFYKNSFLNK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=728629 N3Z98_RS05775 WP_066776893.1 1137725..1138909(-) (kpsS) [Campylobacter hepaticus strain RBCL71delta]
ATGAGATTTAGTGACAAAATTAAAAAAGAATTTAGTGATAAAAATGTTTTACTTTTGCAAGGTCCTGTAGGGAATTTCTT
TCATAAACTTGCTATAAAAATGCAAAAAAATAAAACTAAAGTTTTTAAATTAAATTTTAATGGTGGAGATTTTTTTTTCT
ATCCAAGTGGTATACGATGTAAATGTCATGAAGTAGAGCTTGAAAATTTTTATGAAAATTTTTTAAAAACTAAAAAAATT
GATGCTATTATTATGTATAATGATTGTCGTATTATCCATGCTAAAGCTATTAAAATAGCTAAACGATTAAATCTTGCAAT
TTGGATTTTTGAAGAGGGGTATTTAAGACCTTATTGCATTACTTTGGAGCAAAATGGGGTTAATGCTAATTCTTTTTTGC
CTAAAGACAAGAATTTTTATCTTTACCAAAATATTTGTACAAAAGACAGTATCAAAGAAATTCCTGGTAGTTTTAAATTT
ATAGCTTTTGATGCTTTTTTATATTGGTTATTTGCTTTTCTTTTAGCCCCATTTTTTAATAATAAGCTTCATCATAGAAC
TTTATATCCTTTTGAGTTTTTATTTTGGTTTAGATCTTTATATAGAAAATATCTTTACAAAATTACAGAAAAAAAACTCA
ATAAAAAAATTTATAATTTAGATAAAAAATATTTTTTAGCAATTTTACAAGTTTATAATGATACCCAAATTAAATATCAT
TATAAAAAAAGCATAGAATATTTTATAGAAGAAATCATACTTTCTTTTGCAAATCATGCAAGGGCTAAGTCTTATCTTGT
TTTTAAGCATCATCCTATGGATAGAGGATATAAAAATTATACAAGATTGATACAAAATTTAAGTCAAAAATATCATGTTG
AAGGTAGGGTTTTATATGTGCATGATACGCATTTGCCAACCCTTTTAAAAAAAGCTTTAGGTTGCATTACTATTAATTCC
ACAGTAGGTTTTAGTGCTATTTTAGAAGGATGTCCAACTAAGGTTTGTGGGAATGCTTTTTATGATTTTGAGGGTTTAAC
TTATCCTAGGAAATTGCAGTTTTTTTGGAGAGAAGCCCATGCTTATAAACCCAATCCTATTTTAACAATTAATTTTAAAG
CTTATCTTTTACAAACTAATCAATTTAATGGTAATTTTTATAAAAATTCTTTTTTGAATAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6A7JST6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

86.548

100

0.865