Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   N3Z98_RS05220 Genome accession   NZ_CP104325
Coordinates   1015153..1015680 (-) Length   175 a.a.
NCBI ID   WP_066776442.1    Uniprot ID   A0A6A7JQR5
Organism   Campylobacter hepaticus strain RBCL71delta     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1010153..1020680
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N3Z98_RS05205 (N3Z98_05205) - 1010282..1012003 (-) 1722 WP_066776007.1 flagellin A -
  N3Z98_RS05210 (N3Z98_05210) - 1012087..1013910 (-) 1824 WP_066776004.1 motility associated factor glycosyltransferase family protein -
  N3Z98_RS05215 (N3Z98_05215) - 1013919..1015166 (-) 1248 WP_196913971.1 DUF2920 family protein -
  N3Z98_RS05220 (N3Z98_05220) ctsG 1015153..1015680 (-) 528 WP_066776442.1 type II secretion system protein Machinery gene
  N3Z98_RS05225 (N3Z98_05225) tsaD 1015684..1016691 (-) 1008 WP_066775999.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  N3Z98_RS05230 (N3Z98_05230) - 1016688..1018082 (-) 1395 WP_066775997.1 M99 family carboxypeptidase catalytic domain-containing protein -
  N3Z98_RS05235 (N3Z98_05235) dxr 1018084..1019154 (-) 1071 WP_066775992.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  N3Z98_RS05240 (N3Z98_05240) - 1019151..1019876 (-) 726 WP_066775990.1 phosphatidate cytidylyltransferase -
  N3Z98_RS05245 (N3Z98_05245) - 1019887..1020222 (-) 336 WP_066775987.1 hypothetical protein -

Sequence

Protein


Download         Length: 175 a.a.        Molecular weight: 19348.26 Da        Isoelectric Point: 5.3253

>NTDB_id=728628 N3Z98_RS05220 WP_066776442.1 1015153..1015680(-) (ctsG) [Campylobacter hepaticus strain RBCL71delta]
MKKAFTILELVFVVVILGILLAFALPKFSSSKNEAELSRSLNNLKTLINDISIYALKNDTLASMSMMSNVDEVENVDLRH
LNGVKEVGFGVGDDRQCLKLVFIDRADFVLMGISSNEESKNAIINKAGGTRENFDDIDFTSTSSSRICVALSKSENFKNL
ARKTYLLIGELNDSK

Nucleotide


Download         Length: 528 bp        

>NTDB_id=728628 N3Z98_RS05220 WP_066776442.1 1015153..1015680(-) (ctsG) [Campylobacter hepaticus strain RBCL71delta]
ATGAAAAAAGCTTTTACTATACTTGAACTTGTTTTTGTGGTGGTGATTTTGGGGATTTTGCTTGCTTTTGCTTTACCTAA
ATTTAGTTCTAGTAAAAATGAAGCTGAACTGAGTAGATCGTTAAATAATCTTAAAACTTTGATCAATGATATAAGTATTT
ATGCTTTAAAAAATGATACTTTGGCTTCTATGAGTATGATGAGCAATGTTGATGAAGTTGAAAATGTTGATCTTAGGCAT
TTAAATGGGGTTAAAGAAGTTGGTTTTGGTGTGGGTGATGATAGGCAGTGTTTAAAACTTGTTTTTATTGATAGGGCTGA
TTTTGTTTTGATGGGAATTTCAAGCAATGAAGAGAGTAAAAATGCTATTATTAATAAAGCTGGTGGTACTAGGGAGAATT
TTGATGATATTGATTTTACTAGCACTTCAAGTAGTAGAATTTGTGTGGCTTTAAGTAAGAGTGAAAATTTTAAAAATTTG
GCTAGAAAAACTTATCTTTTAATAGGGGAGCTTAATGATAGTAAATGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6A7JQR5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

71.006

96.571

0.686