Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | N3Z98_RS04040 | Genome accession | NZ_CP104325 |
| Coordinates | 777111..777413 (+) | Length | 100 a.a. |
| NCBI ID | WP_066778773.1 | Uniprot ID | A0A424Z1U0 |
| Organism | Campylobacter hepaticus strain RBCL71delta | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 772111..782413
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N3Z98_RS04015 (N3Z98_04015) | rpsR | 772491..772751 (+) | 261 | WP_066778782.1 | 30S ribosomal protein S18 | - |
| N3Z98_RS04020 (N3Z98_04020) | lon | 772794..775169 (-) | 2376 | WP_066778780.1 | endopeptidase La | - |
| N3Z98_RS04025 (N3Z98_04025) | bamD | 775183..775830 (-) | 648 | WP_066778777.1 | outer membrane protein assembly factor BamD | - |
| N3Z98_RS04030 (N3Z98_04030) | fliW | 775995..776384 (+) | 390 | WP_066778774.1 | flagellar assembly protein FliW | - |
| N3Z98_RS04035 (N3Z98_04035) | proC | 776386..777114 (+) | 729 | WP_260338497.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| N3Z98_RS04040 (N3Z98_04040) | ctsT | 777111..777413 (+) | 303 | WP_066778773.1 | transformation system protein | Machinery gene |
| N3Z98_RS04045 (N3Z98_04045) | - | 777410..778069 (+) | 660 | WP_066778770.1 | hypothetical protein | - |
| N3Z98_RS04050 (N3Z98_04050) | - | 778066..778518 (+) | 453 | WP_066778768.1 | hypothetical protein | - |
| N3Z98_RS04055 (N3Z98_04055) | - | 778515..779144 (-) | 630 | WP_066778766.1 | uroporphyrinogen-III synthase | - |
| N3Z98_RS04060 (N3Z98_04060) | thiE | 779122..779754 (-) | 633 | WP_066778764.1 | thiamine phosphate synthase | - |
| N3Z98_RS04065 (N3Z98_04065) | thiD | 779744..780556 (-) | 813 | WP_066778763.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| N3Z98_RS04070 (N3Z98_04070) | - | 780553..781239 (-) | 687 | WP_066778760.1 | endonuclease III domain-containing protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12393.62 Da Isoelectric Point: 9.7409
>NTDB_id=728622 N3Z98_RS04040 WP_066778773.1 777111..777413(+) (ctsT) [Campylobacter hepaticus strain RBCL71delta]
MKKAFILIELINAMIIISLIFTGIFYYYTHLYKNYENLNTFEKLYKLQNQLYEKPMFKTIILKTSNLKTMILQEQFSQDH
IFKFQKLYFQNQNYNIYFKE
MKKAFILIELINAMIIISLIFTGIFYYYTHLYKNYENLNTFEKLYKLQNQLYEKPMFKTIILKTSNLKTMILQEQFSQDH
IFKFQKLYFQNQNYNIYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=728622 N3Z98_RS04040 WP_066778773.1 777111..777413(+) (ctsT) [Campylobacter hepaticus strain RBCL71delta]
ATGAAAAAAGCCTTTATACTTATAGAATTAATCAATGCTATGATTATCATATCTTTAATTTTTACCGGTATTTTTTATTA
TTATACCCATCTTTACAAAAACTATGAAAACTTAAATACCTTTGAAAAACTTTATAAACTTCAAAATCAGTTATATGAAA
AACCGATGTTTAAAACCATTATATTAAAAACATCAAATTTAAAAACTATGATCTTACAAGAACAATTTAGTCAAGATCAT
ATATTTAAATTTCAAAAATTATACTTTCAAAATCAAAATTACAATATTTACTTTAAAGAATGA
ATGAAAAAAGCCTTTATACTTATAGAATTAATCAATGCTATGATTATCATATCTTTAATTTTTACCGGTATTTTTTATTA
TTATACCCATCTTTACAAAAACTATGAAAACTTAAATACCTTTGAAAAACTTTATAAACTTCAAAATCAGTTATATGAAA
AACCGATGTTTAAAACCATTATATTAAAAACATCAAATTTAAAAACTATGATCTTACAAGAACAATTTAGTCAAGATCAT
ATATTTAAATTTCAAAAATTATACTTTCAAAATCAAAATTACAATATTTACTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
77 |
100 |
0.77 |