Detailed information NTG0072856

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: W01_RS12285
• Genome accession: NZ_AP019547
• Coordinates: 2698229..2699203 (+)
• Length: 324 a.a.
• NCBI ID: WP_173055962.1
• Uniprot ID: A0A455X801
• Organism: Candidatus Nitrotoga sp. AM1P
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2693229..2704203

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
W01_RS12255 (W01_23900)	-	2693638..2694090 (+)	453	WP_173055111.1	GNAT family N-acetyltransferase	-
W01_RS12260 (W01_23910)	-	2694101..2694358 (-)	258	WP_173055113.1	YfhL family 4Fe-4S dicluster ferredoxin	-
W01_RS12265 (W01_23920)	coaD	2694375..2694851 (-)	477	WP_173055115.1	pantetheine-phosphate adenylyltransferase	-
W01_RS12270 (W01_23930)	rsmD	2694848..2695396 (-)	549	WP_173055960.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
W01_RS12275 (W01_23940)	-	2695393..2696733 (-)	1341	WP_173055117.1	pitrilysin family protein	-
W01_RS12280 (W01_23950)	-	2696723..2698054 (-)	1332	WP_242007087.1	pitrilysin family protein	-
W01_RS12285 (W01_23960)	pilA	2698229..2699203 (+)	975	WP_173055962.1	signal recognition particle-docking protein FtsY	Machinery gene
W01_RS12290 (W01_23970)	ftsE	2699200..2699853 (+)	654	WP_173055121.1	cell division ATP-binding protein FtsE	-
W01_RS12295 (W01_23980)	ftsX	2699850..2700758 (+)	909	WP_173055123.1	permease-like cell division protein FtsX	-
W01_RS12300 (W01_23990)	-	2700988..2702199 (+)	1212	WP_173055125.1	tetratricopeptide repeat protein	-
W01_RS12305 (W01_24000)	-	2702328..2702747 (-)	420	WP_173055127.1	helix-turn-helix domain-containing protein	-
W01_RS12310 (W01_24020)	-	2703243..2704046 (+)	804	WP_173055129.1	hypothetical protein	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 34733.37 Da
• Isoelectric Point: 8.0763

>NTDB_id=72856 W01_RS12285 WP_173055962.1 2698229..2699203(+) (pilA) [Candidatus Nitrotoga sp. AM1P]
MFGFLKKTSIESKSKPVEDPPKKSGWISRLKSGLARTADQMSDLFGRGGKIDDDLYEELETILITADVGMDATRFLLAEL
RRQVKVQRLTEAVQLKEALAHDLIKLLKPLAQPLETDLHKPCVIMLAGVNGAGKTTSIGKLAKYFQGQGKSVLLAAGDTF
RAAAREQLMEWGARNNVTVIAQQSGDAAAVIFDAVQAAQARKIDIVLADTAGRLSTQIHLMEEIKKVKRVIAKALPGAPH
EVLLVLDANTGQNALSQVKAFDDALAVTGLVLTKLDGTAKGGVIAAIAKAHPIPLRFIGVGEGLDDLRPFVAEDFVTALL
GLDE

Nucleotide

• Length: 975 bp

>NTDB_id=72856 W01_RS12285 WP_173055962.1 2698229..2699203(+) (pilA) [Candidatus Nitrotoga sp. AM1P]
ATGTTCGGCTTCCTAAAAAAAACCTCAATTGAAAGCAAGTCCAAGCCGGTCGAAGACCCGCCTAAAAAAAGCGGCTGGAT
CAGCCGACTTAAGAGCGGATTGGCGCGCACTGCCGATCAAATGTCCGATTTGTTTGGCCGTGGCGGCAAGATCGACGACG
ACCTGTATGAGGAGCTGGAAACCATTCTGATTACCGCAGATGTCGGAATGGACGCAACTCGTTTTTTACTGGCCGAGTTG
CGCCGACAAGTCAAAGTGCAGCGACTCACTGAAGCAGTTCAGCTAAAGGAGGCGTTGGCGCACGACCTGATCAAACTGCT
CAAGCCACTGGCCCAGCCTTTGGAAACTGATTTACATAAACCTTGCGTCATTATGCTGGCCGGCGTAAATGGCGCTGGCA
AAACAACCTCCATTGGCAAGCTGGCGAAGTATTTTCAAGGGCAGGGCAAGTCAGTACTGCTGGCCGCAGGTGATACCTTC
CGCGCCGCTGCGCGTGAACAGTTGATGGAATGGGGTGCGCGGAATAATGTTACCGTCATCGCCCAGCAAAGCGGCGATGC
CGCAGCGGTGATTTTCGATGCGGTGCAAGCAGCCCAGGCACGCAAAATCGACATAGTGCTGGCCGATACTGCCGGACGTC
TGTCTACCCAGATCCATTTGATGGAAGAAATTAAAAAGGTCAAGCGCGTTATTGCCAAGGCGTTACCCGGTGCACCACAT
GAAGTGCTGTTGGTACTGGATGCAAACACCGGGCAGAACGCGTTAAGCCAAGTCAAGGCATTTGACGACGCGCTGGCTGT
AACGGGCCTGGTACTGACCAAGCTGGATGGCACTGCCAAAGGTGGCGTCATTGCTGCCATCGCCAAGGCACATCCCATTC
CCCTGCGCTTTATTGGCGTGGGAGAAGGGCTGGATGACCTGCGTCCATTTGTAGCGGAAGACTTCGTCACGGCACTTTTG
GGGCTGGATGAATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (40-102)

• SRP54-type protein, GTPase domain (SRP54) (122-321)

3D structure

• AlphaFold DB: A0A455X801

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	67.327	93.519	0.63