Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   N2K92_RS13615 Genome accession   NZ_CP104297
Coordinates   2881962..2882846 (-) Length   294 a.a.
NCBI ID   WP_071210863.1    Uniprot ID   A0A1S2G307
Organism   Acinetobacter baumannii strain ZHOU     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2876962..2887846
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N2K92_RS13600 (N2K92_13615) miaB 2878810..2880261 (+) 1452 WP_000218141.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  N2K92_RS13605 (N2K92_13620) - 2880299..2881378 (+) 1080 WP_071210864.1 PhoH family protein -
  N2K92_RS13610 (N2K92_13625) ybeY 2881397..2881873 (+) 477 WP_000703571.1 rRNA maturation RNase YbeY -
  N2K92_RS13615 (N2K92_13630) tonB2 2881962..2882846 (-) 885 WP_071210863.1 energy transducer TonB Machinery gene
  N2K92_RS13620 (N2K92_13635) - 2883077..2883748 (+) 672 WP_001193958.1 hypothetical protein -
  N2K92_RS13625 (N2K92_13640) - 2883906..2884619 (+) 714 WP_000201542.1 DUF3108 domain-containing protein -
  N2K92_RS13630 (N2K92_13645) - 2884692..2885267 (+) 576 WP_000543071.1 xanthine phosphoribosyltransferase -
  N2K92_RS13635 (N2K92_13650) wrbA 2885320..2885913 (-) 594 WP_001183355.1 NAD(P)H:quinone oxidoreductase -
  N2K92_RS13640 (N2K92_13655) - 2886201..2887448 (+) 1248 WP_000893466.1 YihY family inner membrane protein -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33694.59 Da        Isoelectric Point: 9.0935

>NTDB_id=728423 N2K92_RS13615 WP_071210863.1 2881962..2882846(-) (tonB2) [Acinetobacter baumannii strain ZHOU]
MLKKRSLSIEPFYYWWQDRVFIVAIILAILLHIFVLLIHFAMPAPSEQSTKEIAISIRPTEDVIKHADFLAQADQQGSGA
FREAHRMSSNSPTPMPSDASTGEAQLETLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKLELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKASVRRGAPFGRFDANMKDISELRIIRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=728423 N2K92_RS13615 WP_071210863.1 2881962..2882846(-) (tonB2) [Acinetobacter baumannii strain ZHOU]
ATGTTGAAAAAAAGAAGTCTATCCATAGAGCCTTTTTATTATTGGTGGCAAGACCGAGTCTTTATTGTCGCGATAATACT
CGCAATCTTACTGCATATTTTTGTGTTGCTCATCCATTTTGCGATGCCTGCGCCGTCAGAACAATCGACTAAAGAAATTG
CAATATCGATTCGTCCTACTGAAGATGTGATCAAGCATGCAGACTTTTTAGCTCAAGCCGATCAACAAGGTTCAGGAGCT
TTTCGGGAAGCTCATCGGATGTCGAGTAACTCTCCAACGCCTATGCCAAGTGATGCTTCAACAGGAGAAGCTCAGCTAGA
AACTTTAGAAAAAGTGCAGCAACAAAGAGAACTTAAATTTGAAGAAAAAGTACTCATGACTGTATTGAGTTGGCAGAAAC
AAGCAGAGGAGAGCCAAAGAAAAAAAGCACTTGAACAATTACAAAGTCAGTTTCAGGCAAAAGCTGCCATGGTAGCGAGT
CTTGAAGCTCAGTATTTACAACGTCAGCAAGATTTTAGTCGCCAACAAAAGATAAAAACAGTAGATGGTATTCAAGCCAA
GAAAGATGCGTCAGCAGCTTATCTAGATAAATTTCGTGAAAAACTAGAGCTTTATGGCAACCGTTATTATCCAGAAGAAG
CGAAACAGCAACAGTTAAAAGGTGAAGTTCGCCTTATGGTAATTTTGAATGCTCAAGGGGGAATTCGTGCAATTCGTTTG
CTTGAAAGCTCAGGCCATCCAGTTCTAGATGAAGCAGCAAAGGCATCGGTACGGCGTGGAGCGCCATTTGGCCGTTTTGA
TGCAAATATGAAAGATATTTCAGAGCTTCGTATTATTCGTACATGGCGTTTTGATCCAGCTGAAGCTGAATTTGAAGTTC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1S2G307

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

98.98

100

0.99