Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | N2K92_RS05635 | Genome accession | NZ_CP104297 |
| Coordinates | 1184461..1184841 (+) | Length | 126 a.a. |
| NCBI ID | WP_071210882.1 | Uniprot ID | A0A1S2G2L6 |
| Organism | Acinetobacter baumannii strain ZHOU | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1179461..1189841
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N2K92_RS05605 (N2K92_05620) | kdsB | 1180364..1181125 (+) | 762 | WP_045544209.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| N2K92_RS05610 (N2K92_05625) | - | 1181137..1182117 (+) | 981 | WP_045544208.1 | DNA polymerase III subunit delta' | - |
| N2K92_RS05615 (N2K92_05630) | - | 1182129..1182470 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| N2K92_RS05620 (N2K92_05635) | - | 1182488..1183261 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| N2K92_RS05625 (N2K92_05640) | - | 1183299..1183907 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| N2K92_RS05630 (N2K92_05645) | - | 1183917..1184471 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| N2K92_RS05635 (N2K92_05650) | xcpV | 1184461..1184841 (+) | 381 | WP_071210882.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| N2K92_RS05640 (N2K92_05655) | xcpW | 1184841..1185542 (+) | 702 | WP_000594572.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| N2K92_RS05645 (N2K92_05660) | gspK | 1185542..1186501 (+) | 960 | WP_045544206.1 | type II secretion system minor pseudopilin GspK | - |
| N2K92_RS05650 (N2K92_05665) | - | 1186731..1187327 (+) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| N2K92_RS05655 (N2K92_05670) | ung | 1187378..1188091 (+) | 714 | WP_001177530.1 | uracil-DNA glycosylase | - |
| N2K92_RS05660 (N2K92_05675) | - | 1188088..1189212 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| N2K92_RS05665 (N2K92_05680) | tadA | 1189219..1189722 (+) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13989.23 Da Isoelectric Point: 9.8004
>NTDB_id=728416 N2K92_RS05635 WP_071210882.1 1184461..1184841(+) (xcpV) [Acinetobacter baumannii strain ZHOU]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKLQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKLQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=728416 N2K92_RS05635 WP_071210882.1 1184461..1184841(+) (xcpV) [Acinetobacter baumannii strain ZHOU]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAATTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAATTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |