Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   N2K86_RS07520 Genome accession   NZ_CP104285
Coordinates   1616272..1616898 (+) Length   208 a.a.
NCBI ID   WP_042719042.1    Uniprot ID   -
Organism   Enterobacter mori strain JT.W3M11     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1611272..1621898
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N2K86_RS07500 (N2K86_07500) - 1611670..1613430 (-) 1761 WP_260661014.1 Lon protease family protein -
  N2K86_RS07505 (N2K86_07505) matP 1613617..1614069 (+) 453 WP_010429344.1 macrodomain Ter protein MatP -
  N2K86_RS07510 (N2K86_07510) ompA 1614134..1615189 (-) 1056 WP_010429345.1 porin OmpA -
  N2K86_RS07515 (N2K86_07515) sulA 1615545..1616054 (-) 510 WP_260661642.1 SOS-induced cell division inhibitor SulA -
  N2K86_RS07520 (N2K86_07520) sxy/tfoX 1616272..1616898 (+) 627 WP_042719042.1 TfoX/Sxy family DNA transformation protein Regulator
  N2K86_RS07525 (N2K86_07525) yccS 1616855..1619017 (-) 2163 WP_260661015.1 YccS family putative transporter -
  N2K86_RS07530 (N2K86_07530) - 1619036..1619482 (-) 447 WP_100165146.1 YccF domain-containing protein -
  N2K86_RS07535 (N2K86_07535) helD 1619606..1621660 (+) 2055 WP_260661017.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24057.66 Da        Isoelectric Point: 8.7699

>NTDB_id=728247 N2K86_RS07520 WP_042719042.1 1616272..1616898(+) (sxy/tfoX) [Enterobacter mori strain JT.W3M11]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDNAVFAMVSEGELYLRACEESARYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRDKLLQLSSFALDAARKERCQRHQRNRLKDLPNLTFQLEVLLLEAGITNEETLRELGARKCWLKMRSKN
KALSIKVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQEHHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=728247 N2K86_RS07520 WP_042719042.1 1616272..1616898(+) (sxy/tfoX) [Enterobacter mori strain JT.W3M11]
ATGAAAAAGATATCTTATGAGCGGATTTATAAATCGCAGGAATACCTCTCACCGTTAGGCGAAATTCATCATCGGGCGCT
ATTTGGTGGGTACACCCTGGCGGTGGATAATGCGGTGTTCGCGATGGTGTCGGAGGGTGAACTCTACCTCCGAGCCTGTG
AAGAAAGTGCCAGGTATTGTGTCAAAAACGCCTCTTCGTTTCTGACGCTAATGAAACGAGGCCGTCCCGTCCTGCTTAAT
TACTATCGGGTGGACGACGGGCTTTGGCAGGACAGGGACAAATTGCTCCAGCTTTCCTCCTTTGCTCTCGACGCGGCAAG
GAAAGAGCGCTGCCAGCGCCATCAGCGCAACCGGCTAAAAGATCTTCCGAATCTGACCTTTCAACTTGAGGTGCTGCTTT
TAGAAGCAGGCATCACTAATGAGGAAACCTTACGGGAACTGGGTGCCAGGAAATGCTGGCTGAAGATGAGGTCCAAAAAC
AAGGCCTTAAGTATTAAGGTGCTGTTCGCGCTGGAAGGTGCCATTGAAGGGCTACATGAAGCGGCGCTCCCGGCCGACAT
TCGCCGGGAGCTGACAGAGTGGTTTAATGCGCTGCCTGAGAGTCAGGAGCATCATTCCTCAAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.621

97.596

0.572