Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   N2K85_RS07595 Genome accession   NZ_CP104284
Coordinates   1634677..1635303 (+) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei subsp. steigerwaltii strain JT.WLB1A     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1629677..1640303
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N2K85_RS07575 (N2K85_07575) - 1630076..1631836 (-) 1761 WP_017384808.1 Lon protease family protein -
  N2K85_RS07580 (N2K85_07580) matP 1632023..1632475 (+) 453 WP_003858158.1 macrodomain Ter protein MatP -
  N2K85_RS07585 (N2K85_07585) ompA 1632541..1633593 (-) 1053 WP_017694761.1 porin OmpA -
  N2K85_RS07590 (N2K85_07590) sulA 1633950..1634459 (-) 510 WP_032104231.1 SOS-induced cell division inhibitor SulA -
  N2K85_RS07595 (N2K85_07595) sxy/tfoX 1634677..1635303 (+) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  N2K85_RS07600 (N2K85_07600) yccS 1635260..1637422 (-) 2163 WP_063136402.1 YccS family putative transporter -
  N2K85_RS07605 (N2K85_07605) - 1637441..1637887 (-) 447 WP_003858149.1 YccF domain-containing protein -
  N2K85_RS07610 (N2K85_07610) helD 1638010..1640064 (+) 2055 WP_047057584.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=728225 N2K85_RS07595 WP_017384804.1 1634677..1635303(+) (sxy/tfoX) [Enterobacter hormaechei subsp. steigerwaltii strain JT.WLB1A]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=728225 N2K85_RS07595 WP_017384804.1 1634677..1635303(+) (sxy/tfoX) [Enterobacter hormaechei subsp. steigerwaltii strain JT.WLB1A]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAATCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572