Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   N2K12_RS15445 Genome accession   NZ_CP104279
Coordinates   3250050..3250436 (-) Length   128 a.a.
NCBI ID   WP_043380869.1    Uniprot ID   A0A014QCC5
Organism   Comamonas aquatica strain SCLZS63     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3245050..3255436
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N2K12_RS15430 - 3246828..3249062 (-) 2235 WP_260674085.1 methyl-accepting chemotaxis protein -
  N2K12_RS15435 - 3249087..3249629 (-) 543 WP_260674086.1 chemotaxis protein CheW -
  N2K12_RS15440 - 3249641..3250012 (-) 372 WP_042415197.1 response regulator transcription factor -
  N2K12_RS15445 pilG 3250050..3250436 (-) 387 WP_043380869.1 PleD family two-component system response regulator Regulator
  N2K12_RS15450 - 3250496..3250648 (-) 153 WP_260675628.1 rubredoxin -
  N2K12_RS15455 - 3250759..3251748 (+) 990 WP_260674087.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  N2K12_RS15460 hemL 3251732..3253036 (+) 1305 WP_260674088.1 glutamate-1-semialdehyde 2,1-aminomutase -
  N2K12_RS15465 - 3253095..3253700 (-) 606 WP_210929454.1 DNA-3-methyladenine glycosylase I -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 14202.35 Da        Isoelectric Point: 7.1061

>NTDB_id=728213 N2K12_RS15445 WP_043380869.1 3250050..3250436(-) (pilG) [Comamonas aquatica strain SCLZS63]
MSAANASFKVLVVDDSNTIRRSAEIFLKQGGHEVLLAEDGFDALAKVNDFQPQLIFCDILMPKLDGYQTCAIIKRNAHFS
DTPIVMLSSKDGVFDKARGRMVGCQEYLTKPFSKDQLLQAVQQFGRTA

Nucleotide


Download         Length: 387 bp        

>NTDB_id=728213 N2K12_RS15445 WP_043380869.1 3250050..3250436(-) (pilG) [Comamonas aquatica strain SCLZS63]
TTGAGTGCAGCAAACGCATCGTTCAAGGTGCTGGTTGTCGATGACAGCAATACGATCCGCCGCAGTGCCGAGATCTTCCT
CAAGCAAGGGGGGCACGAGGTGCTCCTGGCCGAGGATGGCTTCGACGCGCTGGCCAAGGTCAACGACTTTCAGCCGCAGC
TGATTTTTTGCGACATCCTGATGCCCAAGCTGGATGGCTACCAGACCTGCGCCATCATCAAGCGCAATGCCCATTTTTCG
GACACGCCGATCGTCATGCTGTCTTCCAAGGACGGCGTCTTCGACAAGGCCCGCGGCAGGATGGTGGGGTGCCAGGAATA
CCTCACCAAGCCGTTCTCCAAGGATCAGTTGCTGCAGGCCGTGCAACAGTTCGGACGCACCGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A014QCC5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

56.098

96.094

0.539