Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   P3U47_RS00125 Genome accession   NZ_CP120001
Coordinates   31386..32186 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain Dog165     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 26386..37186
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P3U47_RS00110 (P3U47_00110) walK 27048..28874 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  P3U47_RS00115 (P3U47_00115) yycH 28867..30201 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  P3U47_RS00120 (P3U47_00120) - 30202..30990 (+) 789 WP_001104166.1 two-component system regulatory protein YycI -
  P3U47_RS00125 (P3U47_00125) vicX 31386..32186 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  P3U47_RS00130 (P3U47_00130) adsA 32413..34731 (+) 2319 WP_000645769.1 LPXTG-anchored adenosine synthase AdsA -
  P3U47_RS00135 (P3U47_00135) rlmH 35099..35578 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  P3U47_RS00140 (P3U47_00140) - 35677..36009 (+) 333 WP_323713240.1 dsDNA nuclease domain-containing protein -
  P3U47_RS00145 (P3U47_00145) - 36100..36612 (+) 513 WP_231923488.1 hypothetical protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=728151 P3U47_RS00125 WP_000088649.1 31386..32186(+) (vicX) [Staphylococcus aureus strain Dog165]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=728151 P3U47_RS00125 WP_000088649.1 31386..32186(+) (vicX) [Staphylococcus aureus strain Dog165]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGTGATATGGGACATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474