Detailed information NTG0728023

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: N0B40_RS15055
• Genome accession: NZ_CP104203
• Coordinates: 3251204..3252313 (+)
• Length: 369 a.a.
• NCBI ID: WP_260540932.1
• Uniprot ID: -
• Organism: Chryseobacterium oranimense strain 33-M-3
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 3246204..3257313

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N0B40_RS15035 (N0B40_15035)	sufD	3246704..3248011 (+)	1308	WP_260545898.1	Fe-S cluster assembly protein SufD	-
N0B40_RS15040 (N0B40_15040)	-	3248083..3249003 (-)	921	WP_260540929.1	DUF3078 domain-containing protein	-
N0B40_RS15045 (N0B40_15045)	-	3249219..3250145 (-)	927	WP_260540930.1	DUF3078 domain-containing protein	-
N0B40_RS15050 (N0B40_15050)	-	3250403..3251170 (+)	768	WP_260540931.1	rhomboid family intramembrane serine protease	-
N0B40_RS15055 (N0B40_15055)	dprA	3251204..3252313 (+)	1110	WP_260540932.1	DNA-processing protein DprA	Machinery gene
N0B40_RS15060 (N0B40_15060)	gdhA	3252504..3253862 (+)	1359	WP_260540933.1	NADP-specific glutamate dehydrogenase	-
N0B40_RS15065 (N0B40_15065)	-	3253998..3254366 (+)	369	WP_260540934.1	iron chaperone	-
N0B40_RS15070 (N0B40_15070)	-	3254408..3254719 (-)	312	WP_260540935.1	hypothetical protein	-
N0B40_RS15075 (N0B40_15075)	-	3254834..3255322 (-)	489	WP_260540936.1	YkgJ family cysteine cluster protein	-
N0B40_RS15080 (N0B40_15080)	-	3255322..3256293 (-)	972	WP_260540937.1	ion channel	-
N0B40_RS15085 (N0B40_15085)	-	3256420..3256542 (-)	123	WP_260540938.1	hypothetical protein	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41267.99 Da
• Isoelectric Point: 6.7555

>NTDB_id=728023 N0B40_RS15055 WP_260540932.1 3251204..3252313(+) (dprA) [Chryseobacterium oranimense strain 33-M-3]
MITEEYLYAIALRECSLIGDINFQKLIKSFGSAEEAWKKAKKDYSKTDGLGRKTVAEIGNKDYLEFAEKEIQFCEKNNIR
IKLRHLKELSSLLNECDDAPAILYQKGNFDDSLQKLSIVGTRNMTSYGKQFIEDFFEASQSSKYISVSGLALGVDREVHE
QSLHYKVPTIAVLAHGFHTLYPSKNKKLSERILQEGGSLITEFNSSRKPDRENFIQRNRIIAGISPSTIVVETGFGGGSI
STATFANDYNREIFALPGKITDPNSQGCNQLIFQNKATAISTIKDLMDSLGFNLSKEKTGELFPYSETEVQLTEIQGTVY
QTIKAHPQVSLDDLAEKISVPSYKILPTILELELLGKVKSFSGRQFVAI

Nucleotide

• Length: 1110 bp

>NTDB_id=728023 N0B40_RS15055 WP_260540932.1 3251204..3252313(+) (dprA) [Chryseobacterium oranimense strain 33-M-3]
ATGATCACTGAAGAATATCTCTATGCAATTGCCCTGCGCGAATGCAGCCTGATCGGCGATATTAATTTTCAAAAGCTTAT
AAAATCCTTCGGAAGTGCTGAAGAAGCCTGGAAAAAAGCAAAAAAGGATTATTCAAAGACCGACGGCCTGGGGAGAAAAA
CAGTGGCCGAGATCGGCAACAAAGATTATCTGGAATTTGCAGAAAAAGAAATACAATTCTGCGAAAAGAATAATATCCGG
ATTAAACTCCGCCACCTTAAGGAACTTTCCAGTCTGCTTAATGAATGTGATGATGCTCCTGCAATCCTTTATCAAAAAGG
AAACTTTGATGATTCCCTGCAAAAACTGAGCATCGTAGGAACCAGGAATATGACTTCTTATGGAAAGCAATTTATAGAAG
ATTTCTTTGAAGCATCCCAATCTTCTAAATACATATCTGTGAGCGGATTAGCTCTTGGAGTAGACAGGGAAGTTCACGAA
CAGTCCCTTCACTATAAAGTTCCGACAATAGCGGTCCTTGCCCACGGATTTCACACCTTATACCCCTCCAAAAACAAAAA
ATTATCTGAAAGGATTCTCCAGGAGGGCGGATCATTAATTACAGAATTCAATTCCTCCCGGAAACCGGACCGTGAAAATT
TTATTCAGCGAAATAGAATTATAGCTGGAATTTCTCCTTCAACCATAGTGGTGGAAACCGGTTTTGGCGGCGGCTCAATA
AGCACGGCAACCTTTGCCAATGATTATAACCGTGAGATATTTGCCCTTCCCGGAAAGATAACAGATCCTAACAGTCAGGG
ATGCAATCAGCTGATTTTTCAAAATAAAGCAACTGCCATTTCCACCATTAAGGATCTGATGGATTCGCTTGGGTTCAATC
TCTCAAAAGAAAAAACGGGTGAACTGTTTCCATACAGCGAGACGGAGGTTCAACTTACTGAAATTCAAGGAACCGTATAT
CAGACGATCAAAGCCCATCCTCAGGTATCTCTGGACGATCTGGCTGAGAAGATTTCAGTGCCATCTTATAAAATTCTTCC
TACAATTTTAGAATTGGAGCTTTTGGGGAAAGTAAAATCATTTTCCGGGAGACAATTTGTGGCAATCTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (309-363)

• DNA recombination-mediator protein A (DNA_processg_A) (74-279)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	53.134	99.458	0.528