Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   N2A95_RS10115 Genome accession   NZ_CP104190
Coordinates   1998601..1999326 (-) Length   241 a.a.
NCBI ID   WP_003105648.1    Uniprot ID   A0A0E2UCE4
Organism   Streptococcus parauberis strain HFTC0064     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1993601..2004326
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N2A95_RS10080 (N2A95_10080) rnpM 1993646..1993942 (-) 297 WP_003104517.1 RNase P modulator RnpM -
  N2A95_RS10085 (N2A95_10085) nusA 1993958..1995112 (-) 1155 WP_003108096.1 transcription termination factor NusA -
  N2A95_RS10090 (N2A95_10090) rimP 1995201..1995683 (-) 483 WP_003107545.1 ribosome maturation factor RimP -
  N2A95_RS10100 (N2A95_10100) trmB 1996077..1996712 (-) 636 WP_003107546.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  N2A95_RS10105 (N2A95_10105) ccrZ 1996712..1997503 (-) 792 WP_003107547.1 cell cycle regulator CcrZ -
  N2A95_RS10110 (N2A95_10110) - 1997564..1998598 (-) 1035 WP_003107548.1 ABC transporter permease -
  N2A95_RS10115 (N2A95_10115) pptA 1998601..1999326 (-) 726 WP_003105648.1 ABC transporter ATP-binding protein Regulator
  N2A95_RS10120 (N2A95_10120) - 1999588..2000007 (+) 420 WP_003108095.1 HIT family protein -
  N2A95_RS10125 (N2A95_10125) - 2000004..2000306 (+) 303 WP_003108094.1 hypothetical protein -
  N2A95_RS10130 (N2A95_10130) - 2000339..2001628 (-) 1290 WP_003108093.1 LCP family protein -
  N2A95_RS10135 (N2A95_10135) - 2001637..2002161 (-) 525 WP_003107553.1 GNAT family N-acetyltransferase -
  N2A95_RS10140 (N2A95_10140) tsaE 2002148..2002597 (-) 450 WP_003103132.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  N2A95_RS10145 (N2A95_10145) - 2002686..2004146 (-) 1461 WP_003104259.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26876.31 Da        Isoelectric Point: 5.6444

>NTDB_id=727963 N2A95_RS10115 WP_003105648.1 1998601..1999326(-) (pptA) [Streptococcus parauberis strain HFTC0064]
MLKIENLTGGYINIPVLKDISFSVDAGQLVGLIGLNGAGKSTTINEIIGLLRPYKGSITIDGISLIDDKTAYRKKIGFIP
ETPSLYEELTLAEHIETIAMAYDIPVKEAHDRAKPLLKTYRLEDKLDWYPVHFSKGMKQKVMIICAFIIDPRLFILDEPF
LGLDPLAIADLIAYLDEEKKKGKSILMSTHVLDSAEKMCDRFVILHHGQIRAQGTLDDLRTAFGDNQASLNDIYLALTKE
A

Nucleotide


Download         Length: 726 bp        

>NTDB_id=727963 N2A95_RS10115 WP_003105648.1 1998601..1999326(-) (pptA) [Streptococcus parauberis strain HFTC0064]
ATGTTAAAAATTGAAAATCTGACAGGTGGTTATATTAATATCCCTGTTTTGAAGGACATTTCTTTTTCCGTTGATGCTGG
TCAATTAGTAGGATTAATTGGTTTGAATGGTGCAGGAAAATCAACGACAATCAATGAAATAATTGGTTTGTTAAGACCTT
ATAAAGGTAGCATTACCATTGATGGCATCTCCTTGATAGATGACAAAACAGCCTACAGGAAGAAAATTGGCTTTATACCC
GAAACACCAAGTCTTTACGAAGAATTGACCTTGGCTGAACACATTGAAACAATTGCCATGGCTTACGACATTCCAGTAAA
AGAAGCACATGATCGAGCAAAACCTTTATTGAAAACATATCGTTTGGAGGATAAATTGGATTGGTATCCCGTTCATTTTT
CTAAAGGAATGAAACAAAAAGTAATGATTATCTGTGCTTTTATTATTGATCCTAGGTTATTTATTCTAGATGAACCATTC
CTTGGCTTAGATCCGTTAGCAATTGCTGACTTAATTGCCTATTTGGACGAGGAAAAAAAGAAAGGCAAGTCAATTTTGAT
GAGTACACACGTTCTCGATTCTGCAGAAAAAATGTGTGATCGGTTTGTCATTTTACATCATGGACAAATCCGTGCCCAAG
GGACTTTGGACGATTTACGAACTGCATTTGGTGATAACCAGGCTAGTCTAAATGATATATACTTAGCCTTGACCAAAGAG
GCTTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E2UCE4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

73.222

99.17

0.726
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722