Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   N2A95_RS09160 Genome accession   NZ_CP104190
Coordinates   1806861..1807898 (-) Length   345 a.a.
NCBI ID   WP_003106043.1    Uniprot ID   A0A0E2UF26
Organism   Streptococcus parauberis strain HFTC0064     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1801861..1812898
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N2A95_RS09135 (N2A95_09135) rbsC 1801911..1802861 (-) 951 WP_003105746.1 ribose ABC transporter permease -
  N2A95_RS09140 (N2A95_09140) - 1802863..1804341 (-) 1479 WP_003108161.1 sugar ABC transporter ATP-binding protein -
  N2A95_RS09145 (N2A95_09145) rbsD 1804353..1804751 (-) 399 WP_003102489.1 D-ribose pyranase -
  N2A95_RS09150 (N2A95_09150) rbsK 1804726..1805637 (-) 912 WP_003108158.1 ribokinase -
  N2A95_RS09155 (N2A95_09155) - 1805639..1806613 (-) 975 WP_003108157.1 LacI family DNA-binding transcriptional regulator -
  N2A95_RS09160 (N2A95_09160) sepM 1806861..1807898 (-) 1038 WP_003106043.1 SepM family pheromone-processing serine protease Regulator
  N2A95_RS09165 (N2A95_09165) coaD 1807885..1808376 (-) 492 WP_003103109.1 pantetheine-phosphate adenylyltransferase -
  N2A95_RS09170 (N2A95_09170) rsmD 1808366..1808905 (-) 540 WP_003108156.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  N2A95_RS09175 (N2A95_09175) asnA 1808992..1809984 (-) 993 WP_003105278.1 aspartate--ammonia ligase -
  N2A95_RS09180 (N2A95_09180) arcC 1810152..1811102 (-) 951 WP_003103897.1 carbamate kinase -
  N2A95_RS09185 (N2A95_09185) - 1811126..1812457 (-) 1332 WP_003105780.1 dipeptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37520.30 Da        Isoelectric Point: 9.9732

>NTDB_id=727959 N2A95_RS09160 WP_003106043.1 1806861..1807898(-) (sepM) [Streptococcus parauberis strain HFTC0064]
MKKNNKLKIWLLGIIAVIAIGFSLFYPLPYYIEMPGGAYDIRSVLKVNEQKDKEKGSYNFVAVSISHATFAQILYAWATP
FTEISSAEATTGGYSDADYMRINQFYMETSQNGAVYQALKKAGKPVSLDYLGVYVLDVSKNSSLKGVLNIADTVTSVNQK
HFKSSADLIKFVSAMKLGDKVSVQYTSNGKDKSANGKIIKLKNGKNGIGISLTDHTKVHTKEKIDFTTEGVGGPSAGLMF
TLDILDQINKEDLRKGRNIAGTGTIDQEGKVGDIGGAGLKVVAAAKEGAEIFFVPNNPVDPRVKKVDPKAITNYKEALEA
AKQLKTKMKIVPVKTVDDAISYLKK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=727959 N2A95_RS09160 WP_003106043.1 1806861..1807898(-) (sepM) [Streptococcus parauberis strain HFTC0064]
ATGAAGAAAAATAATAAATTAAAAATCTGGTTATTGGGCATTATTGCTGTCATTGCAATTGGTTTTTCACTATTTTATCC
TCTACCTTATTATATTGAAATGCCTGGTGGTGCCTATGATATCCGTAGTGTCCTTAAGGTAAATGAACAAAAAGACAAGG
AAAAAGGGTCTTATAATTTTGTTGCTGTAAGTATTAGTCATGCGACATTTGCACAAATTCTCTATGCTTGGGCAACACCA
TTTACAGAGATTTCATCAGCAGAAGCAACTACTGGTGGCTATAGTGATGCAGACTACATGAGAATTAATCAATTCTATAT
GGAAACTTCACAAAATGGTGCTGTTTATCAAGCTCTCAAAAAAGCTGGTAAACCTGTTTCCCTTGACTACTTAGGTGTTT
ATGTTCTTGATGTCAGTAAAAATTCTTCTCTTAAAGGGGTTTTGAATATTGCTGATACAGTTACAAGTGTTAATCAAAAA
CACTTTAAGAGTTCAGCTGATTTGATTAAGTTTGTGTCTGCCATGAAGTTGGGGGATAAAGTCAGTGTCCAATATACCAG
TAATGGTAAAGATAAATCAGCCAATGGTAAAATTATTAAGTTGAAAAATGGTAAAAATGGGATTGGAATCAGCTTAACTG
ACCATACCAAAGTACACACTAAAGAAAAAATTGATTTTACAACTGAAGGCGTTGGTGGTCCAAGTGCTGGTTTGATGTTC
ACCCTTGATATTCTTGACCAAATCAATAAAGAAGATTTACGTAAGGGGCGTAATATTGCTGGTACTGGTACAATTGACCA
AGAAGGTAAAGTTGGTGATATTGGTGGTGCAGGCTTAAAAGTAGTTGCGGCTGCTAAAGAAGGGGCAGAGATTTTCTTCG
TTCCTAATAATCCAGTTGATCCGCGTGTCAAAAAAGTTGATCCAAAAGCAATAACTAATTATAAAGAAGCCTTAGAAGCT
GCTAAGCAATTAAAAACAAAAATGAAGATTGTTCCAGTCAAGACAGTCGATGACGCAATCAGTTATCTGAAAAAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0E2UF26

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

68.986

100

0.69