Detailed information NTG0727720

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: P3M65_RS16305
• Genome accession: NZ_CP119719
• Coordinates: 3324103..3325128 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain IZSBS22
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3319103..3330128

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P3M65_RS16275	zapB	3319187..3319432 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
P3M65_RS16280	rraA	3319517..3320002 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
P3M65_RS16285	menA	3320095..3321021 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
P3M65_RS16290	hslU	3321088..3322419 (-)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
P3M65_RS16295	hslV	3322429..3322959 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
P3M65_RS16300	ftsN	3323052..3324011 (-)	960	WP_000068834.1	cell division protein FtsN	-
P3M65_RS16305	cytR	3324103..3325128 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
P3M65_RS16310	priA	3325284..3327482 (-)	2199	WP_001298972.1	primosomal protein N'	Machinery gene
P3M65_RS16315	rpmE	3327685..3327897 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
P3M65_RS16320	-	3327952..3328575 (-)	624	WP_001402674.1	TIGR02117 family protein	-
P3M65_RS16325	yiiX	3328582..3329190 (-)	609	WP_001402675.1	YiiX family permuted papain-like enzyme	-
P3M65_RS16330	metJ	3329250..3329567 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=727720 P3M65_RS16305 WP_000644904.1 3324103..3325128(-) (cytR) [Escherichia coli strain IZSBS22]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=727720 P3M65_RS16305 WP_000644904.1 3324103..3325128(-) (cytR) [Escherichia coli strain IZSBS22]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628