Detailed information NTG0072769

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: KJS76_RS00125
• Genome accession: NZ_AP024513
• Coordinates: 28249..29274 (+)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa isolate Pa12
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 23249..34274

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJS76_RS00100 (RVB2_00220)	-	23437..23754 (-)	318	WP_003120685.1	tetratricopeptide repeat protein	-
KJS76_RS00105 (RVB2_00230)	trkA	23903..25276 (-)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
KJS76_RS00110 (RVB2_00240)	rsmB	25304..26608 (-)	1305	WP_003122291.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
KJS76_RS00115 (RVB2_00250)	fmt	26605..27549 (-)	945	WP_019681057.1	methionyl-tRNA formyltransferase	-
KJS76_RS00120 (RVB2_00260)	def	27604..28110 (-)	507	WP_003107059.1	peptide deformylase	-
KJS76_RS00125 (RVB2_00270)	tsaP	28249..29274 (+)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
KJS76_RS00130 (RVB2_00280)	dprA	29409..30497 (+)	1089	WP_003123764.1	DNA-processing protein DprA	Machinery gene
KJS76_RS00135 (RVB2_00290)	-	30538..31095 (+)	558	WP_016561457.1	Sua5/YciO/YrdC/YwlC family protein	-
KJS76_RS00140 (RVB2_00300)	-	31105..32082 (-)	978	WP_023088698.1	NADPH:quinone reductase	-
KJS76_RS00145 (RVB2_00310)	hemF	32273..33190 (+)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
KJS76_RS00150 (RVB2_00320)	aroE	33248..34072 (+)	825	WP_003111201.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=72769 KJS76_RS00125 WP_003097294.1 28249..29274(+) (tsaP) [Pseudomonas aeruginosa isolate Pa12]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=72769 KJS76_RS00125 WP_003097294.1 28249..29274(+) (tsaP) [Pseudomonas aeruginosa isolate Pa12]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACACTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTATGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393