Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxS   Type   Regulator
Locus tag   KJS82_RS13605 Genome accession   NZ_AP024511
Coordinates   2750370..2750840 (-) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus isolate 2007-13     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 2745370..2755840
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJS82_RS13575 (RVB3_25550) - 2745411..2745824 (+) 414 WP_001123303.1 thiol-disulfide oxidoreductase DCC family protein -
  KJS82_RS13580 (RVB3_25560) - 2746024..2746467 (+) 444 WP_000070866.1 Dps family protein -
  KJS82_RS13585 (RVB3_25570) deoD 2746588..2747298 (-) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  KJS82_RS13590 (RVB3_25580) deoC 2747612..2748274 (+) 663 WP_001083318.1 deoxyribose-phosphate aldolase -
  KJS82_RS13595 (RVB3_25590) - 2748553..2749854 (+) 1302 WP_001242311.1 pyrimidine-nucleoside phosphorylase -
  KJS82_RS13600 (RVB3_25600) - 2749868..2750218 (+) 351 WP_001024035.1 membrane protein -
  KJS82_RS13605 (RVB3_25610) luxS 2750370..2750840 (-) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  KJS82_RS13610 (RVB3_25620) - 2751151..2752335 (+) 1185 WP_001291497.1 M20 family metallopeptidase -
  KJS82_RS13615 (RVB3_25630) - 2752335..2753528 (+) 1194 WP_000183717.1 hypothetical protein -
  KJS82_RS13620 (RVB3_25640) - 2753927..2754598 (+) 672 WP_000120549.1 DUF2750 domain-containing protein -
  KJS82_RS13625 (RVB3_25650) coaW 2754729..2755532 (-) 804 WP_000862728.1 type II pantothenate kinase -

Sequence


Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=72763 KJS82_RS13605 WP_000164421.1 2750370..2750840(-) (luxS) [Staphylococcus aureus isolate 2007-13]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=72763 KJS82_RS13605 WP_000164421.1 2750370..2750840(-) (luxS) [Staphylococcus aureus isolate 2007-13]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCAG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains


Predicted by InterProScan.

(5-148)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P65329

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404


Multiple sequence alignment