Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   N1207_RS08070 Genome accession   NZ_CP104097
Coordinates   1522574..1523158 (+) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus subtilis strain GL-4     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1517574..1528158
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N1207_RS08040 (N1207_08040) dapD 1517762..1518472 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  N1207_RS08045 (N1207_08045) dapI 1518542..1519666 (+) 1125 WP_015252188.1 N-acetyldiaminopimelate deacetylase -
  N1207_RS08050 (N1207_08050) ykuS 1519728..1519973 (+) 246 WP_003232382.1 YkuS family protein -
  N1207_RS08055 (N1207_08055) mscT 1520010..1520813 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  N1207_RS08060 (N1207_08060) ahpA 1521050..1521592 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  N1207_RS08065 (N1207_08065) ykuV 1521662..1522108 (+) 447 WP_041850881.1 thiol-disulfide oxidoreductase YkuV -
  N1207_RS08070 (N1207_08070) rok 1522574..1523158 (+) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  N1207_RS08075 (N1207_08075) cse15 1523199..1524164 (-) 966 WP_041850880.1 spore protein Cse15 -
  N1207_RS08080 (N1207_08080) mobA 1524301..1524900 (+) 600 WP_021479380.1 molybdenum cofactor guanylyltransferase -
  N1207_RS08085 (N1207_08085) moeB 1524951..1525970 (+) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  N1207_RS08090 (N1207_08090) glp 1525988..1527280 (+) 1293 WP_041850879.1 gephyrin-like molybdotransferase Glp -
  N1207_RS08095 (N1207_08095) mobB 1527241..1527762 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=727553 N1207_RS08070 WP_014113628.1 1522574..1523158(+) (rok) [Bacillus subtilis strain GL-4]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=727553 N1207_RS08070 WP_014113628.1 1522574..1523158(+) (rok) [Bacillus subtilis strain GL-4]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCGAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974