Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   N1207_RS06120 Genome accession   NZ_CP104097
Coordinates   1185667..1185858 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain GL-4     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1180667..1190858
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N1207_RS06090 (N1207_06090) argF 1181531..1182490 (+) 960 WP_003232980.1 ornithine carbamoyltransferase -
  N1207_RS06095 (N1207_06095) yjzC 1182576..1182755 (+) 180 WP_003245356.1 YjzC family protein -
  N1207_RS06100 (N1207_06100) yjzD 1182801..1182986 (-) 186 WP_003245236.1 YjzD family protein -
  N1207_RS06105 (N1207_06105) - 1183235..1183969 (+) 735 WP_003245223.1 hypothetical protein -
  N1207_RS06110 (N1207_06110) - 1184051..1184608 (+) 558 WP_003232974.1 hypothetical protein -
  N1207_RS06115 (N1207_06115) med 1184699..1185652 (+) 954 WP_003245494.1 transcriptional regulator Med Regulator
  N1207_RS06120 (N1207_06120) comZ 1185667..1185858 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  N1207_RS06125 (N1207_06125) yjzB 1185888..1186127 (-) 240 WP_003232972.1 spore coat protein YjzB -
  N1207_RS06130 (N1207_06130) fabH 1186292..1187230 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  N1207_RS06135 (N1207_06135) fabF 1187253..1188494 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  N1207_RS06140 (N1207_06140) yjaZ 1188570..1189355 (+) 786 WP_119899243.1 DUF2268 domain-containing protein -
  N1207_RS06145 (N1207_06145) appD 1189547..1190533 (+) 987 WP_033883591.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=727544 N1207_RS06120 WP_003224559.1 1185667..1185858(+) (comZ) [Bacillus subtilis strain GL-4]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=727544 N1207_RS06120 WP_003224559.1 1185667..1185858(+) (comZ) [Bacillus subtilis strain GL-4]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1