Detailed information NTG0727456

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: N1F80_RS04460
• Genome accession: NZ_CP104076
• Coordinates: 955451..956554 (-)
• Length: 367 a.a.
• NCBI ID: WP_004918085.1
• Uniprot ID: -
• Organism: Riemerella anatipestifer strain SCVM0004
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 950451..961554

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N1F80_RS04430 (N1F80_04430)	-	951418..951558 (+)	141	WP_015345427.1	hypothetical protein	-
N1F80_RS04435 (N1F80_04435)	comF	951646..952299 (-)	654	WP_004918078.1	ComF family protein	Machinery gene
N1F80_RS04445 (N1F80_04445)	-	952521..953072 (-)	552	WP_004918080.1	hypothetical protein	-
N1F80_RS04450 (N1F80_04450)	-	953127..953777 (-)	651	WP_004918082.1	HD domain-containing protein	-
N1F80_RS04455 (N1F80_04455)	gdhA	953909..955267 (-)	1359	WP_014938006.1	NADP-specific glutamate dehydrogenase	-
N1F80_RS04460 (N1F80_04460)	dprA	955451..956554 (-)	1104	WP_004918085.1	DNA-processing protein DprA	Machinery gene
N1F80_RS04465 (N1F80_04465)	-	956557..956934 (-)	378	WP_004918086.1	group III truncated hemoglobin	-
N1F80_RS04470 (N1F80_04470)	ruvC	956945..957499 (-)	555	WP_004918088.1	crossover junction endodeoxyribonuclease RuvC	-
N1F80_RS04475 (N1F80_04475)	-	957523..958713 (-)	1191	WP_065189192.1	carboxypeptidase-like regulatory domain-containing protein	-
N1F80_RS04480 (N1F80_04480)	-	958743..959216 (-)	474	WP_004918092.1	Lrp/AsnC family transcriptional regulator	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40491.51 Da
• Isoelectric Point: 6.6968

>NTDB_id=727456 N1F80_RS04460 WP_004918085.1 955451..956554(-) (dprA) [Riemerella anatipestifer strain SCVM0004]
MVNAEEILYSIALRRSPLVGDVIFASLVSEVGSAKEAWGLSKLELRKISGVGKQIASNIGDKNLLKFAEKEIEFCIKNEI
KIHLRHLNQLPRLLGECYDAPAILFQKGDYEDTANNISIVGTRNATAYGKSFLEDLIVQFKNKNIQVISGLALGTDGIAH
QEALKNNIKTSAVLAHGLHIIYPSKHKILAEEILNNGGALFSEFCSDEKPDREHFLQRNRIVAGLSANTIVVESAYAGGS
ISTASFANQYNREVYALAGRLTDKYSQGCNHLIFQNKAKIISSIKGLLKDLDLDNTSKVLELFPSVEVSLTPVQEPVYDI
IKEVNDISLDDLSEKLNQPISKVFPVLLELELLGLIRANSGRRYSII

Nucleotide

• Length: 1104 bp

>NTDB_id=727456 N1F80_RS04460 WP_004918085.1 955451..956554(-) (dprA) [Riemerella anatipestifer strain SCVM0004]
ATGGTAAATGCGGAAGAAATTTTATATTCTATTGCTCTTCGGCGAAGCCCATTGGTGGGAGATGTTATATTTGCAAGTTT
GGTTAGCGAGGTAGGCTCTGCTAAGGAAGCGTGGGGTCTGTCTAAGTTGGAATTACGGAAAATATCAGGCGTAGGTAAGC
AAATTGCCTCAAACATCGGAGATAAAAATCTTTTAAAATTTGCTGAAAAGGAAATAGAGTTCTGCATTAAAAACGAAATA
AAAATCCACTTACGACATCTTAATCAGCTTCCTCGTCTTTTAGGTGAATGTTATGATGCTCCTGCTATTCTTTTTCAAAA
AGGAGATTATGAGGATACCGCTAATAATATTAGTATTGTTGGGACGAGAAATGCCACTGCTTATGGTAAGTCGTTTTTGG
AGGATTTAATTGTTCAGTTTAAAAATAAAAATATTCAAGTCATTAGTGGTTTAGCTTTAGGTACAGACGGAATAGCTCAT
CAAGAGGCTTTAAAAAACAATATAAAAACTTCAGCGGTTTTAGCACACGGTTTACATATCATTTATCCGTCCAAACATAA
AATTCTCGCTGAAGAAATATTAAATAATGGTGGAGCTTTGTTTTCTGAATTCTGCTCTGATGAAAAGCCAGATAGAGAAC
ATTTTTTGCAAAGAAATCGTATTGTGGCAGGGCTTTCGGCTAATACGATTGTGGTAGAGTCTGCTTATGCAGGAGGCTCT
ATTAGCACGGCGAGTTTTGCTAATCAGTATAATAGAGAAGTGTATGCTTTGGCAGGGCGTCTTACAGATAAATATAGCCA
AGGTTGCAATCATCTTATTTTTCAAAATAAAGCTAAAATCATATCTTCTATTAAAGGTTTGCTAAAAGACCTAGATTTGG
ATAATACTTCTAAAGTTTTGGAGCTTTTTCCTTCAGTTGAAGTTTCTTTAACTCCTGTTCAGGAGCCTGTTTATGATATT
ATTAAGGAGGTTAATGATATTTCATTAGATGACTTGTCAGAAAAATTAAATCAACCCATATCTAAAGTGTTTCCTGTTTT
ATTGGAATTAGAATTATTGGGGTTGATAAGGGCAAATTCTGGGAGGAGATATTCTATCATTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

• DprA winged helix domain (DprA_WH) (309-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	100	100	1