Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   KJS82_RS07160 Genome accession   NZ_AP024511
Coordinates   1408589..1409263 (-) Length   224 a.a.
NCBI ID   WP_001166500.1    Uniprot ID   Q99VW2
Organism   Staphylococcus aureus isolate 2007-13     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1403589..1414263
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJS82_RS07145 (RVB3_13350) vraG 1404772..1406661 (-) 1890 WP_000143615.1 ABC transporter permease VraG -
  KJS82_RS07150 (RVB3_13360) vraF 1406651..1407412 (-) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  KJS82_RS07155 (RVB3_13370) graS 1407556..1408596 (-) 1041 WP_001061264.1 histidine kinase GraS/ApsS -
  KJS82_RS07160 (RVB3_13380) braR 1408589..1409263 (-) 675 WP_001166500.1 response regulator transcription factor GraR/ApsR Regulator
  KJS82_RS07165 (RVB3_13390) graX 1409279..1410202 (-) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  KJS82_RS07170 (RVB3_13400) - 1410315..1410821 (+) 507 WP_001668888.1 GNAT family N-acetyltransferase -
  KJS82_RS07175 (RVB3_13410) - 1411030..1411458 (-) 429 WP_000198504.1 hypothetical protein -
  KJS82_RS07180 (RVB3_13420) - 1411787..1412830 (-) 1044 WP_001030772.1 alpha/beta hydrolase -
  KJS82_RS07185 (RVB3_13430) - 1412981..1414048 (-) 1068 WP_000980137.1 membrane protein -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26065.87 Da        Isoelectric Point: 4.3563

>NTDB_id=72744 KJS82_RS07160 WP_001166500.1 1408589..1409263(-) (braR) [Staphylococcus aureus isolate 2007-13]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=72744 KJS82_RS07160 WP_001166500.1 1408589..1409263(-) (braR) [Staphylococcus aureus isolate 2007-13]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCTTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q99VW2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397


Multiple sequence alignment